Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0595 and Dsui_0596 overlap by 8 nucleotides Dsui_0596 and Dsui_0597 are separated by 5 nucleotides Dsui_0597 and Dsui_0598 are separated by 81 nucleotides Dsui_0598 and Dsui_0599 are separated by 136 nucleotides
Dsui_0595: Dsui_0595 - pyrimidine operon attenuation protein/uracil phosphoribosyltransferase, at 592,363 to 592,884
_0595
Dsui_0596: Dsui_0596 - aspartate carbamoyltransferase, at 592,877 to 593,860
_0596
Dsui_0597: Dsui_0597 - dihydroorotase, multifunctional complex type, at 593,866 to 595,110
_0597
Dsui_0598: Dsui_0598 - hypothetical protein, at 595,192 to 595,494
_0598
Dsui_0599: Dsui_0599 - response regulator of the LytR/AlgR family, at 595,631 to 596,344
_0599
Position (kb) 593
594
595
596 Strain fitness (log2 ratio) -2
-1
0
1 at 595.104 kb on + strand at 595.288 kb on + strand, within Dsui_0598 at 595.292 kb on + strand, within Dsui_0598 at 595.297 kb on + strand, within Dsui_0598 at 595.305 kb on - strand, within Dsui_0598 at 595.399 kb on - strand, within Dsui_0598 at 595.539 kb on - strand at 595.751 kb on + strand, within Dsui_0599 at 595.795 kb on - strand at 595.928 kb on + strand, within Dsui_0599 at 596.051 kb on + strand, within Dsui_0599 at 596.069 kb on + strand, within Dsui_0599 at 596.088 kb on - strand, within Dsui_0599 at 596.105 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 595,104 + -0.3 595,288 + Dsui_0598 0.32 -1.5 595,292 + Dsui_0598 0.33 -2.6 595,297 + Dsui_0598 0.35 -1.5 595,305 - Dsui_0598 0.37 -2.5 595,399 - Dsui_0598 0.68 -0.3 595,539 - -0.7 595,751 + Dsui_0599 0.17 +0.9 595,795 - +0.3 595,928 + Dsui_0599 0.42 -0.7 596,051 + Dsui_0599 0.59 +0.3 596,069 + Dsui_0599 0.61 -1.5 596,088 - Dsui_0599 0.64 -1.3 596,105 + Dsui_0599 0.66 +0.3 596,107 + Dsui_0599 0.67 -1.3 596,107 + Dsui_0599 0.67 -1.3 596,107 + Dsui_0599 0.67 -0.7 596,107 + Dsui_0599 0.67 -0.7 596,107 + Dsui_0599 0.67 +0.3 596,107 + Dsui_0599 0.67 -1.3 596,107 + Dsui_0599 0.67 -1.7 596,107 + Dsui_0599 0.67 -0.7
Or see this region's nucleotide sequence