Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0585 and Dsui_0586 are separated by 164 nucleotides Dsui_0586 and Dsui_0587 are separated by 98 nucleotides Dsui_0587 and Dsui_0588 are separated by 6 nucleotides
Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403
_0585
Dsui_0586: Dsui_0586 - hypothetical protein, at 583,568 to 585,022
_0586
Dsui_0587: Dsui_0587 - hypothetical protein, at 585,121 to 585,429
_0587
Dsui_0588: Dsui_0588 - putative GTPase, G3E family, at 585,436 to 586,500
_0588
Position (kb) 583
584
585
586 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 582.570 kb on + strand at 582.688 kb on + strand at 582.781 kb on - strand at 582.835 kb on + strand, within Dsui_0585 at 582.835 kb on + strand, within Dsui_0585 at 582.858 kb on - strand, within Dsui_0585 at 583.021 kb on + strand, within Dsui_0585 at 583.044 kb on + strand, within Dsui_0585 at 583.070 kb on + strand at 583.158 kb on + strand, within Dsui_0585 at 583.166 kb on - strand, within Dsui_0585 at 583.225 kb on + strand at 583.276 kb on + strand at 583.305 kb on + strand, within Dsui_0585 at 583.313 kb on - strand, within Dsui_0585 at 583.318 kb on + strand at 583.364 kb on + strand at 583.374 kb on - strand at 583.437 kb on - strand at 583.597 kb on + strand at 583.599 kb on + strand at 583.607 kb on - strand at 583.649 kb on - strand at 583.695 kb on - strand at 583.734 kb on - strand, within Dsui_0586 at 583.800 kb on - strand, within Dsui_0586 at 583.807 kb on - strand, within Dsui_0586 at 584.094 kb on - strand, within Dsui_0586 at 584.237 kb on + strand, within Dsui_0586 at 584.311 kb on + strand at 584.365 kb on - strand, within Dsui_0586 at 584.418 kb on - strand, within Dsui_0586 at 584.444 kb on - strand, within Dsui_0586 at 584.461 kb on + strand at 584.499 kb on - strand at 584.574 kb on + strand, within Dsui_0586 at 584.582 kb on - strand, within Dsui_0586 at 584.584 kb on + strand at 584.592 kb on - strand, within Dsui_0586 at 584.618 kb on - strand, within Dsui_0586 at 584.628 kb on - strand, within Dsui_0586 at 584.657 kb on - strand, within Dsui_0586 at 584.696 kb on + strand, within Dsui_0586 at 584.729 kb on - strand, within Dsui_0586 at 584.731 kb on + strand, within Dsui_0586 at 585.011 kb on - strand at 585.024 kb on + strand at 585.032 kb on - strand at 585.095 kb on - strand at 585.209 kb on + strand, within Dsui_0587 at 585.226 kb on + strand, within Dsui_0587 at 585.228 kb on - strand, within Dsui_0587 at 585.602 kb on - strand, within Dsui_0588 at 585.659 kb on + strand at 585.774 kb on - strand, within Dsui_0588 at 586.019 kb on - strand, within Dsui_0588
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 582,570 + +0.3 582,688 + +0.3 582,781 - +0.3 582,835 + Dsui_0585 0.36 -1.7 582,835 + Dsui_0585 0.36 +0.3 582,858 - Dsui_0585 0.39 +0.3 583,021 + Dsui_0585 0.57 -0.7 583,044 + Dsui_0585 0.60 +0.3 583,070 + +0.3 583,158 + Dsui_0585 0.72 +0.3 583,166 - Dsui_0585 0.73 -1.7 583,225 + +0.3 583,276 + +0.3 583,305 + Dsui_0585 0.89 -3.0 583,313 - Dsui_0585 0.90 -0.7 583,318 + -0.7 583,364 + +0.3 583,374 - +0.3 583,437 - -2.0 583,597 + -2.3 583,599 + -2.0 583,607 - -1.3 583,649 - -0.7 583,695 - +0.3 583,734 - Dsui_0586 0.11 -2.0 583,800 - Dsui_0586 0.16 -1.3 583,807 - Dsui_0586 0.16 -1.3 584,094 - Dsui_0586 0.36 -0.7 584,237 + Dsui_0586 0.46 -1.7 584,311 + +0.3 584,365 - Dsui_0586 0.55 +0.3 584,418 - Dsui_0586 0.58 -0.7 584,444 - Dsui_0586 0.60 -0.7 584,461 + +0.3 584,499 - +0.3 584,574 + Dsui_0586 0.69 +0.3 584,582 - Dsui_0586 0.70 +0.3 584,584 + +0.3 584,592 - Dsui_0586 0.70 +0.3 584,618 - Dsui_0586 0.72 -1.7 584,628 - Dsui_0586 0.73 +0.3 584,657 - Dsui_0586 0.75 -2.3 584,696 + Dsui_0586 0.78 -2.5 584,729 - Dsui_0586 0.80 -0.7 584,731 + Dsui_0586 0.80 -1.3 585,011 - +0.3 585,024 + -0.7 585,032 - -1.7 585,095 - +0.0 585,209 + Dsui_0587 0.28 +0.3 585,226 + Dsui_0587 0.34 -2.7 585,228 - Dsui_0587 0.35 +0.3 585,602 - Dsui_0588 0.16 -0.6 585,659 + -0.7 585,774 - Dsui_0588 0.32 -0.4 586,019 - Dsui_0588 0.55 -0.7
Or see this region's nucleotide sequence