Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0578 and Dsui_0579 are separated by 211 nucleotides Dsui_0579 and Dsui_0580 are separated by 110 nucleotides
Dsui_0578: Dsui_0578 - homocitrate synthase NifV, at 575,480 to 576,634
_0578
Dsui_0579: Dsui_0579 - putative permease, at 576,846 to 577,721
_0579
Dsui_0580: Dsui_0580 - ATP-dependent protease HslVU, ATPase subunit, at 577,832 to 579,169
_0580
Position (kb) 576
577
578 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 575.962 kb on + strand, within Dsui_0578 at 575.977 kb on - strand, within Dsui_0578 at 575.982 kb on + strand, within Dsui_0578 at 575.990 kb on - strand, within Dsui_0578 at 576.216 kb on - strand, within Dsui_0578 at 576.271 kb on - strand, within Dsui_0578 at 576.399 kb on - strand, within Dsui_0578 at 576.424 kb on + strand, within Dsui_0578 at 576.431 kb on - strand, within Dsui_0578 at 576.450 kb on - strand, within Dsui_0578 at 576.609 kb on + strand at 576.649 kb on - strand at 576.787 kb on - strand at 576.788 kb on - strand at 576.789 kb on + strand at 576.789 kb on + strand at 576.906 kb on - strand at 576.927 kb on + strand at 576.999 kb on + strand, within Dsui_0579 at 577.006 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.315 kb on - strand, within Dsui_0579 at 577.342 kb on - strand, within Dsui_0579 at 577.360 kb on - strand, within Dsui_0579 at 577.373 kb on - strand, within Dsui_0579 at 577.457 kb on - strand, within Dsui_0579 at 577.482 kb on - strand, within Dsui_0579 at 577.732 kb on + strand at 577.758 kb on - strand at 577.891 kb on + strand at 577.974 kb on + strand, within Dsui_0580 at 577.979 kb on - strand, within Dsui_0580 at 578.012 kb on - strand, within Dsui_0580 at 578.022 kb on - strand, within Dsui_0580 at 578.090 kb on - strand, within Dsui_0580 at 578.107 kb on - strand, within Dsui_0580 at 578.157 kb on + strand, within Dsui_0580 at 578.212 kb on + strand, within Dsui_0580 at 578.437 kb on - strand, within Dsui_0580
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 575,962 + Dsui_0578 0.42 -2.3 575,977 - Dsui_0578 0.43 -0.7 575,982 + Dsui_0578 0.43 -0.7 575,990 - Dsui_0578 0.44 -2.0 576,216 - Dsui_0578 0.64 -1.3 576,271 - Dsui_0578 0.68 -1.3 576,399 - Dsui_0578 0.80 +0.3 576,424 + Dsui_0578 0.82 -2.0 576,431 - Dsui_0578 0.82 -0.7 576,450 - Dsui_0578 0.84 +0.3 576,609 + +0.3 576,649 - -0.7 576,787 - -0.2 576,788 - -0.0 576,789 + +0.3 576,789 + -0.7 576,906 - +0.0 576,927 + -0.7 576,999 + Dsui_0579 0.17 -0.7 577,006 + Dsui_0579 0.18 -2.0 577,194 + Dsui_0579 0.40 +0.3 577,194 + Dsui_0579 0.40 -0.7 577,315 - Dsui_0579 0.54 -0.6 577,342 - Dsui_0579 0.57 -0.3 577,360 - Dsui_0579 0.59 -0.8 577,373 - Dsui_0579 0.60 -1.8 577,457 - Dsui_0579 0.70 -0.5 577,482 - Dsui_0579 0.73 -0.4 577,732 + -2.8 577,758 - -0.7 577,891 + +0.3 577,974 + Dsui_0580 0.11 -1.7 577,979 - Dsui_0580 0.11 -0.4 578,012 - Dsui_0580 0.13 -0.5 578,022 - Dsui_0580 0.14 -0.2 578,090 - Dsui_0580 0.19 -0.5 578,107 - Dsui_0580 0.21 -0.6 578,157 + Dsui_0580 0.24 +0.3 578,212 + Dsui_0580 0.28 -0.7 578,437 - Dsui_0580 0.45 +0.4
Or see this region's nucleotide sequence