Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0531 and Dsui_0532 are separated by 58 nucleotides Dsui_0532 and Dsui_0533 are separated by 116 nucleotides Dsui_0533 and Dsui_0534 are separated by 7 nucleotides Dsui_0534 and Dsui_0535 are separated by 31 nucleotides Dsui_0535 and Dsui_0536 are separated by 10 nucleotides
Dsui_0531: Dsui_0531 - ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component, at 536,937 to 537,707
_0531
Dsui_0532: Dsui_0532 - cob(I)alamin adenosyltransferase, at 537,766 to 538,368
_0532
Dsui_0533: Dsui_0533 - cobyrinic acid a,c-diamide synthase, at 538,485 to 539,792
_0533
Dsui_0534: Dsui_0534 - hypothetical protein, at 539,800 to 540,027
_0534
Dsui_0535: Dsui_0535 - hypothetical protein, at 540,059 to 540,304
_0535
Dsui_0536: Dsui_0536 - hemerythrin-like metal-binding domain-containing protein, at 540,315 to 541,775
_0536
Position (kb)
538
539
540 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 537.645 kb on + strand at 537.677 kb on - strand at 537.682 kb on - strand at 537.836 kb on - strand at 537.899 kb on - strand, within Dsui_0532 at 537.899 kb on - strand, within Dsui_0532 at 537.937 kb on - strand, within Dsui_0532 at 538.014 kb on + strand, within Dsui_0532 at 538.053 kb on - strand, within Dsui_0532 at 538.132 kb on - strand, within Dsui_0532 at 538.172 kb on - strand, within Dsui_0532 at 538.212 kb on - strand, within Dsui_0532 at 538.325 kb on + strand at 538.538 kb on + strand at 538.565 kb on + strand at 538.779 kb on + strand, within Dsui_0533 at 538.843 kb on + strand, within Dsui_0533 at 538.876 kb on + strand, within Dsui_0533 at 538.902 kb on - strand at 538.986 kb on - strand at 539.061 kb on + strand, within Dsui_0533 at 539.409 kb on - strand, within Dsui_0533 at 539.521 kb on + strand, within Dsui_0533 at 539.577 kb on - strand at 539.689 kb on + strand at 539.719 kb on - strand at 540.029 kb on - strand at 540.029 kb on - strand at 540.039 kb on + strand at 540.094 kb on - strand, within Dsui_0535 at 540.199 kb on + strand, within Dsui_0535 at 540.444 kb on + strand at 540.537 kb on + strand, within Dsui_0536 at 540.671 kb on - strand, within Dsui_0536 at 540.734 kb on + strand, within Dsui_0536 at 540.767 kb on - strand, within Dsui_0536 at 540.787 kb on - strand, within Dsui_0536
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 537,645 + -0.0 537,677 - -2.8 537,682 - -0.7 537,836 - +0.3 537,899 - Dsui_0532 0.22 -1.7 537,899 - Dsui_0532 0.22 -1.7 537,937 - Dsui_0532 0.28 +0.3 538,014 + Dsui_0532 0.41 -0.3 538,053 - Dsui_0532 0.48 -3.1 538,132 - Dsui_0532 0.61 -0.7 538,172 - Dsui_0532 0.67 -0.7 538,212 - Dsui_0532 0.74 -0.7 538,325 + -2.0 538,538 + +0.3 538,565 + +0.3 538,779 + Dsui_0533 0.22 -0.4 538,843 + Dsui_0533 0.27 -1.3 538,876 + Dsui_0533 0.30 -0.7 538,902 - +0.3 538,986 - +0.3 539,061 + Dsui_0533 0.44 -1.7 539,409 - Dsui_0533 0.71 -1.3 539,521 + Dsui_0533 0.79 -0.7 539,577 - +0.3 539,689 + +0.3 539,719 - -0.7 540,029 - +0.3 540,029 - -2.3 540,039 + -1.7 540,094 - Dsui_0535 0.14 +0.3 540,199 + Dsui_0535 0.57 -0.4 540,444 + -0.6 540,537 + Dsui_0536 0.15 -0.2 540,671 - Dsui_0536 0.24 +0.3 540,734 + Dsui_0536 0.29 -2.7 540,767 - Dsui_0536 0.31 -1.3 540,787 - Dsui_0536 0.32 +0.3
Or see this region's nucleotide sequence