Strain Fitness in Dechlorosoma suillum PS around Dsui_0423

Experiment: ALP with Thallium(I) acetate 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0422 and Dsui_0423 are separated by 50 nucleotidesDsui_0423 and Dsui_0424 are separated by 213 nucleotides Dsui_0422: Dsui_0422 - thiamine biosynthesis protein ThiC, at 424,450 to 426,366 _0422 Dsui_0423: Dsui_0423 - putative permease, at 426,417 to 427,475 _0423 Dsui_0424: Dsui_0424 - phosphoketolase, at 427,689 to 430,109 _0424 Position (kb) 426 427 428Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 426.433 kb on + strandat 426.496 kb on - strandat 426.566 kb on - strand, within Dsui_0423at 426.596 kb on + strand, within Dsui_0423at 426.691 kb on - strand, within Dsui_0423at 426.700 kb on + strandat 426.737 kb on + strandat 426.750 kb on - strand, within Dsui_0423at 426.753 kb on + strand, within Dsui_0423at 426.756 kb on - strand, within Dsui_0423at 426.845 kb on - strand, within Dsui_0423at 426.850 kb on - strand, within Dsui_0423at 426.917 kb on - strand, within Dsui_0423at 427.006 kb on - strand, within Dsui_0423at 427.067 kb on - strand, within Dsui_0423at 427.091 kb on + strand, within Dsui_0423at 427.184 kb on - strand, within Dsui_0423at 427.282 kb on - strand, within Dsui_0423at 427.543 kb on + strandat 427.543 kb on + strandat 427.828 kb on + strandat 427.908 kb on + strandat 427.931 kb on - strand, within Dsui_0424at 428.319 kb on - strand, within Dsui_0424at 428.324 kb on - strand, within Dsui_0424at 428.341 kb on - strandat 428.454 kb on + strand, within Dsui_0424at 428.459 kb on + strand, within Dsui_0424

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml
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426,433 + -2.0
426,496 - -5.2
426,566 - Dsui_0423 0.14 -4.6
426,596 + Dsui_0423 0.17 -1.2
426,691 - Dsui_0423 0.26 -4.0
426,700 + +0.4
426,737 + +0.4
426,750 - Dsui_0423 0.31 -5.3
426,753 + Dsui_0423 0.32 -0.6
426,756 - Dsui_0423 0.32 -6.7
426,845 - Dsui_0423 0.40 -5.2
426,850 - Dsui_0423 0.41 -4.2
426,917 - Dsui_0423 0.47 -4.5
427,006 - Dsui_0423 0.56 -4.3
427,067 - Dsui_0423 0.61 -2.8
427,091 + Dsui_0423 0.64 +0.4
427,184 - Dsui_0423 0.72 -3.3
427,282 - Dsui_0423 0.82 -2.8
427,543 + +0.4
427,543 + +0.4
427,828 + +0.1
427,908 + -0.4
427,931 - Dsui_0424 0.10 -2.0
428,319 - Dsui_0424 0.26 -1.2
428,324 - Dsui_0424 0.26 -0.6
428,341 - -0.6
428,454 + Dsui_0424 0.32 -0.3
428,459 + Dsui_0424 0.32 +0.0

Or see this region's nucleotide sequence