Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0412 and Dsui_0413 are separated by 13 nucleotides Dsui_0413 and Dsui_0414 overlap by 4 nucleotides Dsui_0414 and Dsui_0415 overlap by 4 nucleotides Dsui_0415 and Dsui_0416 overlap by 1 nucleotides
Dsui_0412: Dsui_0412 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 413,293 to 414,246
_0412
Dsui_0413: Dsui_0413 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 414,260 to 415,153
_0413
Dsui_0414: Dsui_0414 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 415,150 to 416,208
_0414
Dsui_0415: Dsui_0415 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 416,205 to 417,185
_0415
Dsui_0416: Dsui_0416 - transcriptional regulator, at 417,185 to 417,922
_0416
Position (kb)
415
416
417 Strain fitness (log2 ratio)
-2
-1
0
1 at 414.221 kb on - strand at 414.365 kb on + strand at 414.583 kb on - strand at 414.640 kb on - strand at 414.845 kb on + strand, within Dsui_0413 at 414.965 kb on - strand at 415.013 kb on + strand at 415.018 kb on + strand at 415.076 kb on + strand at 415.101 kb on + strand at 415.101 kb on + strand at 415.328 kb on - strand, within Dsui_0414 at 415.434 kb on - strand at 415.457 kb on + strand, within Dsui_0414 at 415.519 kb on - strand, within Dsui_0414 at 415.519 kb on - strand, within Dsui_0414 at 415.519 kb on - strand at 415.520 kb on - strand at 415.533 kb on + strand at 415.534 kb on + strand, within Dsui_0414 at 415.561 kb on - strand, within Dsui_0414 at 415.680 kb on + strand, within Dsui_0414 at 415.759 kb on + strand at 415.767 kb on - strand at 415.791 kb on + strand, within Dsui_0414 at 415.829 kb on + strand at 415.878 kb on - strand, within Dsui_0414 at 415.920 kb on - strand, within Dsui_0414 at 415.954 kb on - strand, within Dsui_0414 at 416.076 kb on + strand, within Dsui_0414 at 416.178 kb on + strand at 416.254 kb on + strand at 416.295 kb on - strand at 416.340 kb on + strand, within Dsui_0415 at 416.345 kb on + strand at 416.431 kb on + strand at 416.446 kb on + strand at 416.519 kb on + strand at 416.701 kb on + strand, within Dsui_0415 at 416.701 kb on + strand at 416.752 kb on - strand at 416.885 kb on + strand, within Dsui_0415 at 416.915 kb on - strand, within Dsui_0415 at 416.929 kb on - strand at 416.956 kb on + strand at 416.956 kb on - strand at 417.146 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 414,221 - -0.7 414,365 + -0.7 414,583 - -0.7 414,640 - -0.7 414,845 + Dsui_0413 0.65 -1.2 414,965 - -1.2 415,013 + -0.7 415,018 + -1.2 415,076 + +0.3 415,101 + +0.3 415,101 + +0.3 415,328 - Dsui_0414 0.17 -0.7 415,434 - +0.3 415,457 + Dsui_0414 0.29 -1.2 415,519 - Dsui_0414 0.35 -2.0 415,519 - Dsui_0414 0.35 +0.3 415,519 - +0.3 415,520 - +0.3 415,533 + +0.3 415,534 + Dsui_0414 0.36 -2.0 415,561 - Dsui_0414 0.39 -1.2 415,680 + Dsui_0414 0.50 -1.7 415,759 + -0.7 415,767 - +0.3 415,791 + Dsui_0414 0.61 -1.2 415,829 + +0.3 415,878 - Dsui_0414 0.69 +0.3 415,920 - Dsui_0414 0.73 -0.7 415,954 - Dsui_0414 0.76 +0.3 416,076 + Dsui_0414 0.87 -0.7 416,178 + -1.2 416,254 + -1.2 416,295 - -2.0 416,340 + Dsui_0415 0.14 -0.7 416,345 + +0.3 416,431 + -0.7 416,446 + -0.7 416,519 + +0.3 416,701 + Dsui_0415 0.51 -1.7 416,701 + -0.7 416,752 - +0.3 416,885 + Dsui_0415 0.69 -1.7 416,915 - Dsui_0415 0.72 -2.0 416,929 - +0.3 416,956 + +0.3 416,956 - -1.2 417,146 - +0.3
Or see this region's nucleotide sequence