Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0083 and Dsui_0084 are separated by 10 nucleotides Dsui_0084 and Dsui_0085 are separated by 303 nucleotides
Dsui_0083: Dsui_0083 - UDP-N-acetylglucosamine 4,6-dehydratase, at 80,256 to 81,254
_0083
Dsui_0084: Dsui_0084 - ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain, at 81,265 to 83,040
_0084
Dsui_0085: Dsui_0085 - GDP-mannose 4,6-dehydratase, at 83,344 to 84,435
_0085
Position (kb)
81
82
83
84 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 80.295 kb on + strand at 80.298 kb on - strand at 80.344 kb on - strand at 80.346 kb on + strand at 80.346 kb on + strand at 80.353 kb on - strand at 80.354 kb on - strand at 80.354 kb on - strand at 80.413 kb on + strand, within Dsui_0083 at 80.422 kb on + strand, within Dsui_0083 at 80.459 kb on - strand, within Dsui_0083 at 80.470 kb on + strand, within Dsui_0083 at 80.472 kb on + strand, within Dsui_0083 at 80.472 kb on - strand, within Dsui_0083 at 80.534 kb on - strand, within Dsui_0083 at 80.550 kb on - strand, within Dsui_0083 at 80.561 kb on + strand, within Dsui_0083 at 80.615 kb on + strand, within Dsui_0083 at 80.628 kb on - strand, within Dsui_0083 at 80.628 kb on - strand, within Dsui_0083 at 80.630 kb on + strand, within Dsui_0083 at 80.630 kb on + strand, within Dsui_0083 at 80.642 kb on + strand, within Dsui_0083 at 80.642 kb on + strand, within Dsui_0083 at 80.664 kb on + strand, within Dsui_0083 at 80.690 kb on + strand, within Dsui_0083 at 80.708 kb on - strand, within Dsui_0083 at 80.730 kb on - strand, within Dsui_0083 at 80.845 kb on + strand, within Dsui_0083 at 80.860 kb on - strand, within Dsui_0083 at 80.863 kb on + strand, within Dsui_0083 at 80.863 kb on + strand, within Dsui_0083 at 80.871 kb on - strand, within Dsui_0083 at 80.887 kb on + strand, within Dsui_0083 at 80.888 kb on - strand, within Dsui_0083 at 80.931 kb on - strand, within Dsui_0083 at 80.976 kb on + strand, within Dsui_0083 at 80.976 kb on + strand, within Dsui_0083 at 80.979 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.984 kb on - strand, within Dsui_0083 at 80.986 kb on + strand, within Dsui_0083 at 81.010 kb on + strand, within Dsui_0083 at 81.010 kb on + strand, within Dsui_0083 at 81.033 kb on + strand, within Dsui_0083 at 81.166 kb on + strand at 81.172 kb on + strand at 81.174 kb on - strand at 81.174 kb on - strand at 81.251 kb on + strand at 81.290 kb on - strand at 81.322 kb on - strand at 81.374 kb on - strand at 81.392 kb on + strand at 81.395 kb on + strand at 81.403 kb on - strand at 81.490 kb on - strand, within Dsui_0084 at 81.490 kb on - strand, within Dsui_0084 at 81.492 kb on - strand, within Dsui_0084 at 81.492 kb on - strand, within Dsui_0084 at 81.583 kb on - strand, within Dsui_0084 at 81.712 kb on - strand, within Dsui_0084 at 81.765 kb on + strand, within Dsui_0084 at 81.799 kb on + strand, within Dsui_0084 at 81.817 kb on + strand, within Dsui_0084 at 81.825 kb on - strand, within Dsui_0084 at 81.859 kb on - strand, within Dsui_0084 at 81.893 kb on + strand, within Dsui_0084 at 81.976 kb on + strand, within Dsui_0084 at 81.998 kb on + strand, within Dsui_0084 at 82.012 kb on - strand, within Dsui_0084 at 82.115 kb on + strand, within Dsui_0084 at 82.178 kb on - strand, within Dsui_0084 at 82.183 kb on - strand, within Dsui_0084 at 82.188 kb on + strand, within Dsui_0084 at 82.207 kb on + strand, within Dsui_0084 at 82.258 kb on + strand, within Dsui_0084 at 82.258 kb on + strand, within Dsui_0084 at 82.266 kb on - strand, within Dsui_0084 at 82.299 kb on - strand, within Dsui_0084 at 82.306 kb on + strand, within Dsui_0084 at 82.314 kb on - strand, within Dsui_0084 at 82.315 kb on - strand, within Dsui_0084 at 82.352 kb on + strand, within Dsui_0084 at 82.387 kb on - strand, within Dsui_0084 at 82.484 kb on + strand, within Dsui_0084 at 82.493 kb on - strand, within Dsui_0084 at 82.494 kb on + strand, within Dsui_0084 at 82.499 kb on + strand, within Dsui_0084 at 82.502 kb on - strand, within Dsui_0084 at 82.533 kb on + strand, within Dsui_0084 at 82.541 kb on - strand, within Dsui_0084 at 82.605 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.689 kb on + strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.748 kb on - strand, within Dsui_0084 at 82.782 kb on + strand, within Dsui_0084 at 82.787 kb on - strand, within Dsui_0084 at 82.789 kb on + strand, within Dsui_0084 at 82.812 kb on + strand, within Dsui_0084 at 82.816 kb on - strand, within Dsui_0084 at 82.840 kb on - strand, within Dsui_0084 at 82.910 kb on + strand at 82.927 kb on - strand at 82.937 kb on - strand at 82.937 kb on - strand at 82.945 kb on - strand at 82.968 kb on - strand at 83.002 kb on - strand at 83.008 kb on + strand at 83.034 kb on + strand at 83.116 kb on - strand at 83.133 kb on - strand at 83.150 kb on - strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.202 kb on - strand at 83.263 kb on + strand at 83.290 kb on + strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.303 kb on - strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.371 kb on - strand at 83.371 kb on - strand at 83.405 kb on + strand at 83.407 kb on + strand at 83.407 kb on + strand at 83.413 kb on - strand at 83.413 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.426 kb on + strand at 83.535 kb on - strand, within Dsui_0085 at 83.577 kb on - strand, within Dsui_0085 at 83.607 kb on - strand, within Dsui_0085 at 83.630 kb on - strand, within Dsui_0085 at 83.654 kb on + strand, within Dsui_0085 at 83.655 kb on - strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.665 kb on - strand, within Dsui_0085 at 83.667 kb on - strand, within Dsui_0085 at 83.747 kb on + strand, within Dsui_0085 at 83.762 kb on + strand, within Dsui_0085 at 83.773 kb on + strand, within Dsui_0085 at 83.795 kb on + strand, within Dsui_0085 at 83.796 kb on - strand, within Dsui_0085 at 83.802 kb on + strand, within Dsui_0085 at 83.804 kb on - strand, within Dsui_0085 at 83.864 kb on - strand, within Dsui_0085 at 83.885 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.894 kb on - strand, within Dsui_0085 at 83.895 kb on + strand, within Dsui_0085 at 83.901 kb on - strand, within Dsui_0085 at 83.916 kb on - strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.958 kb on + strand at 83.958 kb on + strand, within Dsui_0085 at 83.964 kb on - strand, within Dsui_0085 at 83.966 kb on - strand, within Dsui_0085 at 84.009 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 80,295 + +0.7 80,298 - -0.5 80,344 - -5.3 80,346 + +0.7 80,346 + +0.7 80,353 - -5.5 80,354 - -5.2 80,354 - -4.6 80,413 + Dsui_0083 0.16 +0.7 80,422 + Dsui_0083 0.17 -0.9 80,459 - Dsui_0083 0.20 -4.0 80,470 + Dsui_0083 0.21 +0.7 80,472 + Dsui_0083 0.22 -1.9 80,472 - Dsui_0083 0.22 -5.2 80,534 - Dsui_0083 0.28 -5.5 80,550 - Dsui_0083 0.29 -4.6 80,561 + Dsui_0083 0.31 -0.9 80,615 + Dsui_0083 0.36 -1.6 80,628 - Dsui_0083 0.37 -4.6 80,628 - Dsui_0083 0.37 -4.8 80,630 + Dsui_0083 0.37 +0.7 80,630 + Dsui_0083 0.37 -0.9 80,642 + Dsui_0083 0.39 +0.7 80,642 + Dsui_0083 0.39 -1.6 80,664 + Dsui_0083 0.41 +0.7 80,690 + Dsui_0083 0.43 -1.6 80,708 - Dsui_0083 0.45 -4.5 80,730 - Dsui_0083 0.47 -4.6 80,845 + Dsui_0083 0.59 +0.7 80,860 - Dsui_0083 0.60 -5.8 80,863 + Dsui_0083 0.61 -0.9 80,863 + Dsui_0083 0.61 +0.7 80,871 - Dsui_0083 0.62 -5.1 80,887 + Dsui_0083 0.63 -0.3 80,888 - Dsui_0083 0.63 -5.2 80,931 - Dsui_0083 0.68 -7.1 80,976 + Dsui_0083 0.72 +0.7 80,976 + Dsui_0083 0.72 -0.9 80,979 - Dsui_0083 0.72 -4.3 80,984 - Dsui_0083 0.73 -5.1 80,984 - Dsui_0083 0.73 -5.0 80,984 - Dsui_0083 0.73 -6.3 80,984 - Dsui_0083 0.73 -5.3 80,984 - Dsui_0083 0.73 -4.4 80,986 + Dsui_0083 0.73 +0.7 81,010 + Dsui_0083 0.75 +0.7 81,010 + Dsui_0083 0.75 +0.7 81,033 + Dsui_0083 0.78 +0.7 81,166 + +0.7 81,172 + -3.0 81,174 - -5.1 81,174 - -4.9 81,251 + +0.7 81,290 - +0.2 81,322 - +0.1 81,374 - -6.6 81,392 + -0.9 81,395 + -0.3 81,403 - -4.5 81,490 - Dsui_0084 0.13 -3.0 81,490 - Dsui_0084 0.13 -5.8 81,492 - Dsui_0084 0.13 -5.8 81,492 - Dsui_0084 0.13 -5.1 81,583 - Dsui_0084 0.18 -6.0 81,712 - Dsui_0084 0.25 -6.0 81,765 + Dsui_0084 0.28 -2.5 81,799 + Dsui_0084 0.30 -0.9 81,817 + Dsui_0084 0.31 -2.8 81,825 - Dsui_0084 0.32 -5.7 81,859 - Dsui_0084 0.33 -5.3 81,893 + Dsui_0084 0.35 -1.3 81,976 + Dsui_0084 0.40 -3.1 81,998 + Dsui_0084 0.41 -1.9 82,012 - Dsui_0084 0.42 -6.2 82,115 + Dsui_0084 0.48 +0.1 82,178 - Dsui_0084 0.51 -6.3 82,183 - Dsui_0084 0.52 -6.5 82,188 + Dsui_0084 0.52 -0.3 82,207 + Dsui_0084 0.53 +0.7 82,258 + Dsui_0084 0.56 -1.6 82,258 + Dsui_0084 0.56 -0.3 82,266 - Dsui_0084 0.56 -5.6 82,299 - Dsui_0084 0.58 -5.4 82,306 + Dsui_0084 0.59 -0.9 82,314 - Dsui_0084 0.59 -6.1 82,315 - Dsui_0084 0.59 -6.1 82,352 + Dsui_0084 0.61 -1.9 82,387 - Dsui_0084 0.63 -5.9 82,484 + Dsui_0084 0.69 -0.3 82,493 - Dsui_0084 0.69 -5.8 82,494 + Dsui_0084 0.69 +0.7 82,499 + Dsui_0084 0.69 -1.6 82,502 - Dsui_0084 0.70 -5.8 82,533 + Dsui_0084 0.71 -0.3 82,541 - Dsui_0084 0.72 -6.2 82,605 - Dsui_0084 0.75 -6.4 82,654 - Dsui_0084 0.78 -5.2 82,654 - Dsui_0084 0.78 -6.6 82,654 - Dsui_0084 0.78 -1.3 82,689 + Dsui_0084 0.80 -0.9 82,697 - Dsui_0084 0.81 -5.8 82,697 - Dsui_0084 0.81 -4.6 82,748 - Dsui_0084 0.84 -6.7 82,782 + Dsui_0084 0.85 +0.7 82,787 - Dsui_0084 0.86 -5.0 82,789 + Dsui_0084 0.86 -2.1 82,812 + Dsui_0084 0.87 -2.3 82,816 - Dsui_0084 0.87 -6.1 82,840 - Dsui_0084 0.89 -6.8 82,910 + -0.3 82,927 - -5.4 82,937 - -6.2 82,937 - -6.9 82,945 - -4.8 82,968 - -5.0 83,002 - -6.0 83,008 + -2.3 83,034 + +0.1 83,116 - +0.2 83,133 - -0.0 83,150 - +0.2 83,168 + -0.9 83,168 + -0.3 83,168 + -1.6 83,168 + -1.3 83,168 + +0.7 83,168 + -0.3 83,168 + -0.3 83,168 + -0.3 83,168 + +0.7 83,176 - +0.1 83,176 - +0.1 83,176 - -0.0 83,176 - -0.0 83,176 - +0.1 83,176 - -0.1 83,176 - +0.2 83,176 - -0.0 83,202 - -0.2 83,263 + +0.7 83,290 + -0.3 83,298 - +0.1 83,298 - +0.1 83,298 - +0.1 83,298 - +0.3 83,303 - -0.3 83,356 + -0.3 83,356 + -0.3 83,371 - -0.1 83,371 - +0.0 83,405 + +0.7 83,407 + -0.9 83,407 + -0.9 83,413 - -1.2 83,413 - -1.3 83,415 - -1.1 83,415 - -3.0 83,415 - -3.1 83,426 + -1.6 83,535 - Dsui_0085 0.17 -6.4 83,577 - Dsui_0085 0.21 -6.1 83,607 - Dsui_0085 0.24 -5.3 83,630 - Dsui_0085 0.26 -5.2 83,654 + Dsui_0085 0.28 +0.7 83,655 - Dsui_0085 0.28 -3.2 83,659 + Dsui_0085 0.29 +0.7 83,659 + Dsui_0085 0.29 -0.3 83,665 - Dsui_0085 0.29 -4.5 83,667 - Dsui_0085 0.30 -5.9 83,747 + Dsui_0085 0.37 -0.9 83,762 + Dsui_0085 0.38 +0.7 83,773 + Dsui_0085 0.39 +0.7 83,795 + Dsui_0085 0.41 +0.7 83,796 - Dsui_0085 0.41 -5.7 83,802 + Dsui_0085 0.42 -0.3 83,804 - Dsui_0085 0.42 -6.0 83,864 - Dsui_0085 0.48 -5.8 83,885 + Dsui_0085 0.50 -1.3 83,893 + Dsui_0085 0.50 -0.9 83,893 + Dsui_0085 0.50 +0.7 83,894 - Dsui_0085 0.50 -6.4 83,895 + Dsui_0085 0.50 -0.3 83,901 - Dsui_0085 0.51 -4.8 83,916 - Dsui_0085 0.52 -4.2 83,939 + Dsui_0085 0.54 +0.7 83,939 + Dsui_0085 0.54 +0.7 83,947 - Dsui_0085 0.55 -6.0 83,947 - Dsui_0085 0.55 -4.9 83,947 - Dsui_0085 0.55 -6.1 83,947 - Dsui_0085 0.55 -4.9 83,947 - Dsui_0085 0.55 -5.6 83,947 - Dsui_0085 0.55 -3.6 83,958 + +0.7 83,958 + Dsui_0085 0.56 -0.3 83,964 - Dsui_0085 0.57 -4.9 83,966 - Dsui_0085 0.57 -5.2 84,009 + Dsui_0085 0.61 +0.7 84,024 + Dsui_0085 0.62 -0.9 84,024 + Dsui_0085 0.62 +0.7 84,024 + +0.7 84,032 - Dsui_0085 0.63 -5.5 84,032 - Dsui_0085 0.63 -5.1 84,032 - Dsui_0085 0.63 -4.9 84,032 - Dsui_0085 0.63 -4.9 84,032 - Dsui_0085 0.63 -5.2
Or see this region's nucleotide sequence