Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0051 and Dsui_0052 are separated by 308 nucleotides Dsui_0052 and Dsui_0053 are separated by 91 nucleotides Dsui_0053 and Dsui_0054 are separated by 11 nucleotides
Dsui_0051: Dsui_0051 - cob(II)yrinic acid a,c-diamide reductase, at 48,309 to 49,079
_0051
Dsui_0052: Dsui_0052 - pyruvate kinase, at 49,388 to 50,833
_0052
Dsui_0053: Dsui_0053 - hypothetical protein, at 50,925 to 51,629
_0053
Dsui_0054: Dsui_0054 - glycosyl transferase possibly involved in lipopolysaccharide synthesis, at 51,641 to 52,201
_0054
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-2
-1
0
1 at 48.539 kb on + strand, within Dsui_0051 at 48.580 kb on - strand, within Dsui_0051 at 48.643 kb on + strand, within Dsui_0051 at 48.727 kb on - strand, within Dsui_0051 at 48.743 kb on + strand, within Dsui_0051 at 48.777 kb on - strand, within Dsui_0051 at 48.811 kb on - strand, within Dsui_0051 at 48.867 kb on - strand, within Dsui_0051 at 49.006 kb on + strand at 49.160 kb on + strand at 49.168 kb on - strand at 49.173 kb on - strand at 49.212 kb on + strand at 49.367 kb on - strand at 49.380 kb on + strand at 49.389 kb on - strand at 49.529 kb on + strand at 49.583 kb on - strand, within Dsui_0052 at 49.733 kb on - strand, within Dsui_0052 at 49.774 kb on + strand, within Dsui_0052 at 49.842 kb on + strand, within Dsui_0052 at 49.855 kb on - strand, within Dsui_0052 at 49.931 kb on - strand, within Dsui_0052 at 49.964 kb on - strand, within Dsui_0052 at 50.000 kb on + strand, within Dsui_0052 at 50.027 kb on + strand, within Dsui_0052 at 50.089 kb on + strand, within Dsui_0052 at 50.101 kb on + strand, within Dsui_0052 at 50.269 kb on - strand, within Dsui_0052 at 50.293 kb on - strand, within Dsui_0052 at 50.293 kb on - strand, within Dsui_0052 at 50.383 kb on + strand, within Dsui_0052 at 50.508 kb on - strand, within Dsui_0052 at 50.534 kb on + strand, within Dsui_0052 at 50.542 kb on - strand, within Dsui_0052 at 50.685 kb on + strand at 50.685 kb on + strand, within Dsui_0052 at 50.685 kb on + strand at 50.685 kb on + strand, within Dsui_0052 at 50.685 kb on + strand, within Dsui_0052 at 50.685 kb on + strand at 50.693 kb on - strand at 50.787 kb on + strand at 50.991 kb on - strand at 51.071 kb on + strand at 51.135 kb on + strand at 51.159 kb on + strand, within Dsui_0053 at 51.495 kb on + strand, within Dsui_0053 at 51.541 kb on - strand, within Dsui_0053 at 51.580 kb on - strand at 51.580 kb on - strand at 51.583 kb on + strand at 51.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 48,539 + Dsui_0051 0.30 +0.7 48,580 - Dsui_0051 0.35 +0.3 48,643 + Dsui_0051 0.43 -0.3 48,727 - Dsui_0051 0.54 -0.0 48,743 + Dsui_0051 0.56 -1.3 48,777 - Dsui_0051 0.61 -0.4 48,811 - Dsui_0051 0.65 +0.7 48,867 - Dsui_0051 0.72 +0.0 49,006 + -0.3 49,160 + -1.3 49,168 - -0.0 49,173 - +0.1 49,212 + -0.9 49,367 - +0.1 49,380 + -1.3 49,389 - +0.3 49,529 + -1.3 49,583 - Dsui_0052 0.13 +0.4 49,733 - Dsui_0052 0.24 -0.3 49,774 + Dsui_0052 0.27 -0.9 49,842 + Dsui_0052 0.31 +0.7 49,855 - Dsui_0052 0.32 -0.4 49,931 - Dsui_0052 0.38 -0.1 49,964 - Dsui_0052 0.40 +0.2 50,000 + Dsui_0052 0.42 +0.7 50,027 + Dsui_0052 0.44 +0.7 50,089 + Dsui_0052 0.48 -0.3 50,101 + Dsui_0052 0.49 +0.7 50,269 - Dsui_0052 0.61 +0.2 50,293 - Dsui_0052 0.63 +0.1 50,293 - Dsui_0052 0.63 -0.1 50,383 + Dsui_0052 0.69 -1.6 50,508 - Dsui_0052 0.77 +0.3 50,534 + Dsui_0052 0.79 -1.6 50,542 - Dsui_0052 0.80 +0.4 50,685 + +0.7 50,685 + Dsui_0052 0.90 -0.3 50,685 + +0.7 50,685 + Dsui_0052 0.90 -0.3 50,685 + Dsui_0052 0.90 -1.9 50,685 + +0.7 50,693 - -0.1 50,787 + +0.7 50,991 - -0.7 51,071 + +0.7 51,135 + +0.7 51,159 + Dsui_0053 0.33 -0.3 51,495 + Dsui_0053 0.81 +0.7 51,541 - Dsui_0053 0.87 -0.8 51,580 - -0.8 51,580 - -0.4 51,583 + +0.7 51,591 - -0.3
Or see this region's nucleotide sequence