Experiment: L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26655 and AZOBR_RS26660 are separated by 56 nucleotides AZOBR_RS26660 and AZOBR_RS26665 are separated by 40 nucleotides AZOBR_RS26665 and AZOBR_RS26670 are separated by 192 nucleotides
AZOBR_RS26655: AZOBR_RS26655 - ATPase, at 127,233 to 129,410
_RS26655
AZOBR_RS26660: AZOBR_RS26660 - signal peptidase II, at 129,467 to 129,997
_RS26660
AZOBR_RS26665: AZOBR_RS26665 - conserved hypothetical protein; putative signal peptide; twin-arginine translocation signal domain protein, at 130,038 to 130,688
_RS26665
AZOBR_RS26670: AZOBR_RS26670 - zinc transporter ZitB, at 130,881 to 131,759
_RS26670
Position (kb) 130
131 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 129.678 kb on - strand, within AZOBR_RS26660 at 130.393 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.641 kb on + strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.832 kb on + strand at 130.832 kb on + strand at 130.833 kb on - strand at 130.844 kb on + strand at 130.844 kb on + strand at 130.844 kb on + strand at 131.094 kb on + strand, within AZOBR_RS26670 at 131.094 kb on + strand, within AZOBR_RS26670 at 131.127 kb on + strand, within AZOBR_RS26670 at 131.128 kb on - strand, within AZOBR_RS26670 at 131.609 kb on - strand, within AZOBR_RS26670
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days remove 129,678 - AZOBR_RS26660 0.40 -2.3 130,393 - AZOBR_RS26665 0.55 -1.4 130,507 - AZOBR_RS26665 0.72 -2.9 130,507 - AZOBR_RS26665 0.72 -3.5 130,641 + -1.1 130,642 - -1.0 130,642 - -4.4 130,642 - -1.3 130,642 - -2.7 130,832 + -1.9 130,832 + -3.9 130,833 - -3.3 130,844 + -3.4 130,844 + -2.5 130,844 + -3.1 131,094 + AZOBR_RS26670 0.24 -4.4 131,094 + AZOBR_RS26670 0.24 -0.6 131,127 + AZOBR_RS26670 0.28 -3.3 131,128 - AZOBR_RS26670 0.28 -4.1 131,609 - AZOBR_RS26670 0.83 -3.8
Or see this region's nucleotide sequence