Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS25560

Experiment: L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS25555 and AZOBR_RS25560 are separated by 97 nucleotidesAZOBR_RS25560 and AZOBR_RS25565 are separated by 134 nucleotidesAZOBR_RS25565 and AZOBR_RS25570 are separated by 76 nucleotides AZOBR_RS25555: AZOBR_RS25555 - hypothetical protein, at 783,227 to 784,078 _RS25555 AZOBR_RS25560: AZOBR_RS25560 - hypothetical protein, at 784,176 to 784,658 _RS25560 AZOBR_RS25565: AZOBR_RS25565 - hypothetical protein, at 784,793 to 785,554 _RS25565 AZOBR_RS25570: AZOBR_RS25570 - hypothetical protein, at 785,631 to 786,425 _RS25570 Position (kb) 784 785Strain fitness (log2 ratio) -1 0 1at 783.303 kb on + strandat 783.529 kb on - strand, within AZOBR_RS25555at 783.529 kb on - strand, within AZOBR_RS25555at 783.948 kb on + strand, within AZOBR_RS25555at 783.948 kb on + strand, within AZOBR_RS25555at 783.949 kb on - strand, within AZOBR_RS25555at 783.949 kb on - strand, within AZOBR_RS25555at 783.949 kb on - strand, within AZOBR_RS25555at 783.949 kb on - strand, within AZOBR_RS25555at 783.952 kb on - strand, within AZOBR_RS25555at 783.952 kb on - strand, within AZOBR_RS25555at 783.952 kb on - strand, within AZOBR_RS25555at 784.292 kb on - strand, within AZOBR_RS25560at 784.523 kb on + strand, within AZOBR_RS25560at 784.686 kb on + strandat 785.145 kb on + strand, within AZOBR_RS25565at 785.145 kb on + strand, within AZOBR_RS25565at 785.145 kb on + strand, within AZOBR_RS25565at 785.145 kb on + strand, within AZOBR_RS25565at 785.145 kb on + strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.146 kb on - strand, within AZOBR_RS25565at 785.632 kb on + strandat 785.633 kb on - strandat 785.633 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
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783,303 + -0.5
783,529 - AZOBR_RS25555 0.35 +0.2
783,529 - AZOBR_RS25555 0.35 +0.5
783,948 + AZOBR_RS25555 0.85 +0.0
783,948 + AZOBR_RS25555 0.85 -0.8
783,949 - AZOBR_RS25555 0.85 -1.4
783,949 - AZOBR_RS25555 0.85 -0.0
783,949 - AZOBR_RS25555 0.85 +0.4
783,949 - AZOBR_RS25555 0.85 +1.2
783,952 - AZOBR_RS25555 0.85 +1.5
783,952 - AZOBR_RS25555 0.85 +0.5
783,952 - AZOBR_RS25555 0.85 -0.1
784,292 - AZOBR_RS25560 0.24 -0.4
784,523 + AZOBR_RS25560 0.72 -1.5
784,686 + +0.0
785,145 + AZOBR_RS25565 0.46 -0.2
785,145 + AZOBR_RS25565 0.46 +0.7
785,145 + AZOBR_RS25565 0.46 +0.4
785,145 + AZOBR_RS25565 0.46 -0.1
785,145 + AZOBR_RS25565 0.46 +0.0
785,146 - AZOBR_RS25565 0.46 -0.1
785,146 - AZOBR_RS25565 0.46 +0.7
785,146 - AZOBR_RS25565 0.46 -0.0
785,146 - AZOBR_RS25565 0.46 +0.2
785,146 - AZOBR_RS25565 0.46 +0.3
785,146 - AZOBR_RS25565 0.46 -1.5
785,146 - AZOBR_RS25565 0.46 +0.6
785,146 - AZOBR_RS25565 0.46 -0.7
785,146 - AZOBR_RS25565 0.46 -0.4
785,632 + -0.3
785,633 - +0.4
785,633 - +0.7

Or see this region's nucleotide sequence