Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25190

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
5,557,059	-		AO353_25185	0.53	-0.8
5,557,059	-		AO353_25185	0.53	+1.5
5,557,059	-		AO353_25185	0.53	+0.4
5,557,093	-		AO353_25185	0.57	+1.1
5,557,093	-		AO353_25185	0.57	+2.3
5,557,114	+		AO353_25185	0.59	+1.0
5,557,114	+		AO353_25185	0.59	+0.5
5,557,114	+		AO353_25185	0.59	+0.5
5,557,114	+		AO353_25185	0.59	+0.5
5,557,114	+		AO353_25185	0.59	+1.9
5,557,114	+		AO353_25185	0.59	+0.0
5,557,115	-		AO353_25185	0.59	+1.6
5,557,115	-		AO353_25185	0.59	+0.8
5,557,115	-		AO353_25185	0.59	+1.4
5,557,159	-		AO353_25185	0.63	+0.4
5,557,159	-		AO353_25185	0.63	+1.4
5,557,159	-		AO353_25185	0.63	+0.7
5,557,411	+		AO353_25185	0.87	-1.4
5,557,461	-				+1.0
5,557,461	-				+0.9
5,557,461	-				+1.1
5,557,461	-				+1.4
5,557,481	+				-0.4
5,557,481	+				-1.5
5,557,482	-				+2.1
5,557,482	-				+1.1
5,557,482	-				+0.2
5,557,482	-				+0.8
5,557,602	+				-2.3
5,557,655	+				-1.9
5,557,689	-				+2.3
5,557,716	+				+1.7
5,557,782	-				+2.1
5,557,807	-				+0.7
5,557,870	+		AO353_25190	0.11	+0.1
5,557,870	+		AO353_25190	0.11	+0.8
5,557,870	+		AO353_25190	0.11	-0.4
5,557,870	+		AO353_25190	0.11	+1.2
5,557,870	+		AO353_25190	0.11	+2.3
5,557,870	+		AO353_25190	0.11	+2.0
5,557,870	+		AO353_25190	0.11	+0.9
5,557,871	-		AO353_25190	0.12	+1.0
5,557,871	-		AO353_25190	0.12	+2.4
5,557,871	-		AO353_25190	0.12	+0.6
5,557,871	-		AO353_25190	0.12	+1.4
5,557,871	-		AO353_25190	0.12	+1.8
5,557,871	-		AO353_25190	0.12	+1.1
5,557,871	-		AO353_25190	0.12	+2.1
5,557,872	+		AO353_25190	0.12	+1.4
5,557,872	+		AO353_25190	0.12	+1.0
5,557,872	+		AO353_25190	0.12	+1.6
5,557,872	+		AO353_25190	0.12	+1.4
5,557,872	+		AO353_25190	0.12	-1.6
5,557,873	-		AO353_25190	0.12	+1.9
5,557,873	-		AO353_25190	0.12	+1.5
5,557,873	-		AO353_25190	0.12	+1.5
5,558,051	+		AO353_25190	0.24	+0.7
5,558,074	+		AO353_25190	0.26	+2.2
5,558,091	-		AO353_25190	0.27	+1.8
5,558,115	+		AO353_25190	0.29	+1.6
5,558,115	+		AO353_25190	0.29	+1.6
5,558,115	+		AO353_25190	0.29	+3.4
5,558,120	+		AO353_25190	0.29	-0.2
5,558,120	+		AO353_25190	0.29	+1.6
5,558,255	+		AO353_25190	0.39	+1.9
5,558,470	+		AO353_25190	0.54	+2.3
5,558,470	+		AO353_25190	0.54	+1.5
5,558,471	-		AO353_25190	0.54	+1.1
5,558,494	-		AO353_25190	0.56	+1.8
5,558,583	+		AO353_25190	0.62	+2.4
5,558,584	-		AO353_25190	0.62	-1.0
5,558,636	+		AO353_25190	0.66	+2.6
5,558,636	+		AO353_25190	0.66	+3.3
5,558,637	-		AO353_25190	0.66	+2.3
5,558,637	-		AO353_25190	0.66	+2.1
5,558,712	+		AO353_25190	0.71	+0.7
5,558,715	+		AO353_25190	0.71	+1.6
5,558,716	-		AO353_25190	0.71	+1.9
5,558,716	-		AO353_25190	0.71	+1.3
5,558,808	+		AO353_25190	0.78	-0.9
5,558,809	-		AO353_25190	0.78	+1.4
5,558,820	+		AO353_25190	0.79	+1.0
5,558,872	+		AO353_25190	0.82	+0.5
5,558,872	+		AO353_25190	0.82	+1.8
5,558,873	-		AO353_25190	0.82	+0.3
5,558,873	-		AO353_25190	0.82	+1.2
5,558,887	-		AO353_25190	0.83	+1.4
5,558,921	-		AO353_25190	0.86	+1.9
5,558,978	+		AO353_25190	0.90	+1.1
5,558,996	+				-0.3
5,558,996	+				+1.5
5,558,996	+				+1.0
5,558,996	+				+2.4
5,558,996	+				+2.1
5,559,012	+				+0.9
5,559,061	+				+1.4
5,559,086	+				-0.0
5,559,086	+				+1.6
5,559,086	+				+0.6
5,559,086	+				+1.7
5,559,087	-				+1.8
5,559,087	-				+1.0
5,559,087	-				+1.2
5,559,115	+				+1.1
5,559,115	+				-0.4
5,559,116	-				-0.1
5,559,141	+				-0.7
5,559,141	+				+1.2
5,559,142	-				+1.3
5,559,142	-				+0.5
5,559,156	+				+1.0
5,559,156	+				+2.5
5,559,157	-				-0.8
5,559,157	-				+0.9
5,559,157	-				+1.0
5,559,200	+				+1.2
5,559,221	+				-0.2
5,559,221	+				+1.6
5,559,222	-				+0.7
5,559,253	+				-1.5
5,559,253	+				+1.9
5,559,264	+				+0.1
5,559,264	+				+0.8
5,559,264	+				+0.3
5,559,265	-				+2.1
5,559,265	-				-0.9
5,559,265	-				+1.2
5,559,265	-				+0.3
5,559,265	-				+1.3
5,559,271	-				+0.0
5,559,340	+				+1.6
5,559,340	+				-1.5
5,559,341	-				+1.0
5,559,341	-				+2.0
5,559,373	+				-0.1
5,559,446	+				+1.2
5,559,446	+				+0.3
5,559,449	+				+0.9
5,559,450	-				-1.6
5,559,450	-				+0.2
5,559,450	-				-0.7
5,559,450	-				-1.1
5,559,458	+				+0.3
5,559,458	+				-0.2
5,559,458	+				-0.4
5,559,458	+				+1.3
5,559,459	-				+0.8
5,559,459	-				+1.2
5,559,525	+		AO353_25195	0.17	+0.2
5,559,525	+		AO353_25195	0.17	-0.0
5,559,526	-		AO353_25195	0.17	-0.0
5,559,526	-		AO353_25195	0.17	+0.3
5,559,632	+		AO353_25195	0.34	+0.7
5,559,633	-		AO353_25195	0.34	-0.2
5,559,633	-		AO353_25195	0.34	+0.3
5,559,633	-		AO353_25195	0.34	+1.3
5,559,800	-		AO353_25195	0.62	-1.4
5,559,800	-				+2.3
5,559,802	+		AO353_25195	0.63	-1.0
5,559,802	+		AO353_25195	0.63	+0.0
5,559,802	+		AO353_25195	0.63	+0.4
5,559,802	+		AO353_25195	0.63	+2.0
5,559,803	-		AO353_25195	0.63	+0.8
5,559,803	-		AO353_25195	0.63	-0.8
5,559,803	-		AO353_25195	0.63	+0.4
5,559,803	-		AO353_25195	0.63	+2.1
5,559,857	+		AO353_25195	0.72	-0.6
5,559,857	+		AO353_25195	0.72	-0.2
5,559,858	-		AO353_25195	0.72	+0.1
5,559,858	-		AO353_25195	0.72	-0.6
5,559,909	-		AO353_25195	0.80	-0.2
5,559,970	+				+0.2
5,560,011	+				-0.4
5,560,012	-				-0.3
5,560,012	-				-0.4
5,560,085	-				+0.4
5,560,103	-				-0.1