Experiment: L-Citrulline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19505 and AO353_19510 are separated by 93 nucleotides AO353_19510 and AO353_19515 are separated by 146 nucleotides
AO353_19505: AO353_19505 - FAD-dependent oxidoreductase, at 4,274,106 to 4,275,401
_19505
AO353_19510: AO353_19510 - aldehyde dehydrogenase, at 4,275,495 to 4,276,985
_19510
AO353_19515: AO353_19515 - haloacid dehalogenase, at 4,277,132 to 4,277,803
_19515
Position (kb)
4275
4276
4277 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4274.680 kb on - strand, within AO353_19505 at 4274.742 kb on + strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.984 kb on + strand, within AO353_19505 at 4275.075 kb on + strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505 at 4275.376 kb on + strand at 4275.399 kb on + strand at 4275.400 kb on - strand at 4275.458 kb on + strand at 4275.459 kb on - strand at 4275.496 kb on + strand at 4275.497 kb on - strand at 4275.497 kb on - strand at 4275.529 kb on + strand at 4275.530 kb on - strand at 4275.530 kb on - strand at 4275.530 kb on - strand at 4275.547 kb on + strand at 4275.581 kb on - strand at 4275.692 kb on + strand, within AO353_19510 at 4275.692 kb on + strand, within AO353_19510 at 4275.693 kb on - strand, within AO353_19510 at 4275.709 kb on + strand, within AO353_19510 at 4275.728 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.913 kb on + strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.914 kb on - strand, within AO353_19510 at 4275.919 kb on + strand, within AO353_19510 at 4275.919 kb on + strand, within AO353_19510 at 4275.920 kb on - strand, within AO353_19510 at 4275.920 kb on - strand, within AO353_19510 at 4275.920 kb on - strand, within AO353_19510 at 4275.920 kb on - strand, within AO353_19510 at 4275.920 kb on - strand, within AO353_19510 at 4276.054 kb on + strand, within AO353_19510 at 4276.055 kb on - strand, within AO353_19510 at 4276.055 kb on - strand, within AO353_19510 at 4276.055 kb on - strand, within AO353_19510 at 4276.055 kb on - strand, within AO353_19510 at 4276.055 kb on - strand, within AO353_19510 at 4276.326 kb on + strand, within AO353_19510 at 4276.326 kb on + strand, within AO353_19510 at 4276.327 kb on - strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.603 kb on + strand, within AO353_19510 at 4276.692 kb on + strand, within AO353_19510 at 4276.692 kb on + strand, within AO353_19510 at 4276.692 kb on + strand, within AO353_19510 at 4276.692 kb on + strand, within AO353_19510 at 4276.693 kb on - strand, within AO353_19510 at 4276.693 kb on - strand, within AO353_19510 at 4276.693 kb on - strand, within AO353_19510 at 4276.972 kb on + strand at 4276.973 kb on - strand at 4276.973 kb on - strand at 4276.988 kb on + strand at 4276.988 kb on + strand at 4276.988 kb on + strand at 4276.988 kb on + strand at 4276.988 kb on + strand at 4276.988 kb on + strand at 4276.989 kb on - strand at 4276.989 kb on - strand at 4277.054 kb on + strand at 4277.055 kb on - strand at 4277.055 kb on - strand at 4277.055 kb on - strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.133 kb on + strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.134 kb on - strand at 4277.135 kb on + strand at 4277.135 kb on + strand at 4277.135 kb on + strand at 4277.135 kb on + strand at 4277.136 kb on - strand at 4277.136 kb on - strand at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.413 kb on + strand, within AO353_19515 at 4277.414 kb on - strand, within AO353_19515 at 4277.414 kb on - strand, within AO353_19515 at 4277.414 kb on - strand, within AO353_19515 at 4277.638 kb on - strand, within AO353_19515 at 4277.839 kb on - strand at 4277.851 kb on + strand at 4277.851 kb on + strand at 4277.851 kb on + strand at 4277.851 kb on + strand at 4277.852 kb on - strand at 4277.852 kb on - strand at 4277.853 kb on + strand at 4277.853 kb on + strand at 4277.854 kb on - strand at 4277.869 kb on + strand at 4277.869 kb on + strand at 4277.869 kb on + strand at 4277.869 kb on + strand at 4277.869 kb on + strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.870 kb on - strand at 4277.905 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (C) remove 4,274,680 - AO353_19505 0.44 +0.2 4,274,742 + AO353_19505 0.49 -0.6 4,274,743 - AO353_19505 0.49 -0.1 4,274,743 - AO353_19505 0.49 -1.6 4,274,984 + AO353_19505 0.68 -0.4 4,275,075 + AO353_19505 0.75 +0.1 4,275,076 - AO353_19505 0.75 -0.2 4,275,076 - AO353_19505 0.75 -0.5 4,275,376 + -0.1 4,275,399 + -0.6 4,275,400 - +0.5 4,275,458 + +0.7 4,275,459 - -0.1 4,275,496 + -0.6 4,275,497 - +0.9 4,275,497 - +0.3 4,275,529 + -0.5 4,275,530 - -0.6 4,275,530 - -0.1 4,275,530 - +1.2 4,275,547 + +0.6 4,275,581 - +0.9 4,275,692 + AO353_19510 0.13 -0.6 4,275,692 + AO353_19510 0.13 +1.1 4,275,693 - AO353_19510 0.13 +0.2 4,275,709 + AO353_19510 0.14 +0.5 4,275,728 + AO353_19510 0.16 -1.3 4,275,913 + AO353_19510 0.28 +0.1 4,275,913 + AO353_19510 0.28 -1.3 4,275,913 + AO353_19510 0.28 -0.0 4,275,913 + AO353_19510 0.28 +0.1 4,275,913 + AO353_19510 0.28 -0.3 4,275,913 + AO353_19510 0.28 -0.2 4,275,913 + AO353_19510 0.28 +1.0 4,275,914 - AO353_19510 0.28 +1.5 4,275,914 - AO353_19510 0.28 -0.8 4,275,914 - AO353_19510 0.28 -0.5 4,275,914 - AO353_19510 0.28 -0.4 4,275,914 - AO353_19510 0.28 -1.0 4,275,914 - AO353_19510 0.28 -0.8 4,275,914 - AO353_19510 0.28 -0.6 4,275,919 + AO353_19510 0.28 +0.1 4,275,919 + AO353_19510 0.28 -0.1 4,275,920 - AO353_19510 0.29 +0.1 4,275,920 - AO353_19510 0.29 +0.3 4,275,920 - AO353_19510 0.29 +0.1 4,275,920 - AO353_19510 0.29 +0.6 4,275,920 - AO353_19510 0.29 -0.4 4,276,054 + AO353_19510 0.37 -2.2 4,276,055 - AO353_19510 0.38 -0.5 4,276,055 - AO353_19510 0.38 -0.5 4,276,055 - AO353_19510 0.38 -0.3 4,276,055 - AO353_19510 0.38 +0.7 4,276,055 - AO353_19510 0.38 +0.2 4,276,326 + AO353_19510 0.56 -1.1 4,276,326 + AO353_19510 0.56 +1.1 4,276,327 - AO353_19510 0.56 +1.1 4,276,603 + AO353_19510 0.74 +0.2 4,276,603 + AO353_19510 0.74 +1.9 4,276,603 + AO353_19510 0.74 -1.6 4,276,603 + AO353_19510 0.74 -1.3 4,276,603 + AO353_19510 0.74 +0.7 4,276,603 + AO353_19510 0.74 +0.3 4,276,692 + AO353_19510 0.80 +1.1 4,276,692 + AO353_19510 0.80 -1.1 4,276,692 + AO353_19510 0.80 +0.4 4,276,692 + AO353_19510 0.80 -0.9 4,276,693 - AO353_19510 0.80 -2.7 4,276,693 - AO353_19510 0.80 +0.1 4,276,693 - AO353_19510 0.80 +0.4 4,276,972 + +0.8 4,276,973 - +1.1 4,276,973 - +0.3 4,276,988 + -0.1 4,276,988 + -0.8 4,276,988 + -1.0 4,276,988 + +0.4 4,276,988 + -1.1 4,276,988 + -0.5 4,276,989 - -0.9 4,276,989 - -0.1 4,277,054 + +1.4 4,277,055 - +0.8 4,277,055 - +0.3 4,277,055 - -1.0 4,277,133 + +1.0 4,277,133 + -0.7 4,277,133 + -0.7 4,277,133 + -1.4 4,277,133 + -1.3 4,277,133 + -0.9 4,277,133 + -1.4 4,277,133 + -0.2 4,277,133 + +0.9 4,277,133 + +1.7 4,277,133 + -0.3 4,277,133 + +0.1 4,277,133 + -0.4 4,277,133 + +0.1 4,277,133 + -0.1 4,277,133 + +0.6 4,277,133 + +1.1 4,277,133 + -0.7 4,277,133 + +0.3 4,277,133 + -2.1 4,277,133 + +1.4 4,277,133 + +0.1 4,277,133 + +0.2 4,277,133 + -0.5 4,277,133 + +0.3 4,277,133 + +0.9 4,277,133 + +0.9 4,277,133 + +0.3 4,277,133 + -0.8 4,277,133 + -0.0 4,277,134 - -0.3 4,277,134 - -0.5 4,277,134 - +2.2 4,277,134 - -0.3 4,277,134 - -0.2 4,277,134 - -0.9 4,277,134 - +1.9 4,277,134 - +1.1 4,277,134 - -0.5 4,277,134 - -0.1 4,277,134 - -0.3 4,277,134 - +0.7 4,277,134 - +0.2 4,277,134 - +0.7 4,277,134 - -0.5 4,277,134 - +1.0 4,277,135 + -0.9 4,277,135 + -1.0 4,277,135 + -0.8 4,277,135 + -0.3 4,277,136 - +0.2 4,277,136 - +0.1 4,277,413 + AO353_19515 0.42 -0.1 4,277,413 + AO353_19515 0.42 +0.2 4,277,413 + AO353_19515 0.42 +0.1 4,277,413 + AO353_19515 0.42 +0.7 4,277,413 + AO353_19515 0.42 -0.7 4,277,413 + AO353_19515 0.42 +1.1 4,277,413 + AO353_19515 0.42 -0.1 4,277,413 + AO353_19515 0.42 +1.5 4,277,414 - AO353_19515 0.42 +1.0 4,277,414 - AO353_19515 0.42 -0.7 4,277,414 - AO353_19515 0.42 +1.3 4,277,638 - AO353_19515 0.75 -0.3 4,277,839 - +1.2 4,277,851 + -0.5 4,277,851 + -0.9 4,277,851 + -1.0 4,277,851 + -2.0 4,277,852 - -0.5 4,277,852 - -0.6 4,277,853 + +1.1 4,277,853 + +0.5 4,277,854 - +1.1 4,277,869 + -0.1 4,277,869 + -0.7 4,277,869 + -1.9 4,277,869 + +0.1 4,277,869 + +0.3 4,277,870 - +0.5 4,277,870 - -0.8 4,277,870 - +1.7 4,277,870 - +0.4 4,277,870 - +0.5 4,277,870 - +0.5 4,277,870 - +0.1 4,277,870 - +0.5 4,277,870 - -1.5 4,277,870 - -1.6 4,277,905 + -1.2
Or see this region's nucleotide sequence