Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3938

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,731,948	-				+0.8
4,731,948	-				+0.9
4,731,958	-				+0.5
4,732,017	-				+0.8
4,732,099	-				+0.4
4,732,148	-				+0.7
4,732,215	-		Shewana3_3937	0.17	-0.1
4,732,460	+		Shewana3_3937	0.61	+0.3
4,732,852	+				-0.1
4,732,852	+				+0.2
4,733,033	+				+0.7
4,733,033	+				+1.1
4,733,041	-				-0.7
4,733,097	+				+0.5
4,733,176	-		Shewana3_3938	0.13	+1.1
4,733,302	+		Shewana3_3938	0.20	-0.2
4,733,302	+		Shewana3_3938	0.20	+0.7
4,733,379	+		Shewana3_3938	0.23	-0.2
4,733,403	+		Shewana3_3938	0.25	+0.1
4,733,403	+		Shewana3_3938	0.25	+0.5
4,733,503	+		Shewana3_3938	0.29	-0.1
4,733,578	+		Shewana3_3938	0.33	+1.2
4,733,578	+		Shewana3_3938	0.33	+0.4
4,733,674	-		Shewana3_3938	0.38	+0.6
4,733,777	+		Shewana3_3938	0.43	-0.7
4,733,822	+		Shewana3_3938	0.45	+0.6
4,733,854	-		Shewana3_3938	0.47	-3.1
4,733,908	+		Shewana3_3938	0.49	+0.2
4,733,928	-		Shewana3_3938	0.50	+0.2
4,734,125	+		Shewana3_3938	0.60	+0.1
4,734,130	+		Shewana3_3938	0.60	+1.1
4,734,204	+		Shewana3_3938	0.64	+0.4
4,734,428	-		Shewana3_3938	0.75	-0.5
4,734,480	-		Shewana3_3938	0.77	+0.5
4,734,576	+		Shewana3_3938	0.82	-0.4
4,734,586	+		Shewana3_3938	0.82	-0.1
4,734,594	-		Shewana3_3938	0.83	+0.9
4,734,674	-		Shewana3_3938	0.87	+0.3
4,734,680	-		Shewana3_3938	0.87	+0.7
4,734,687	+		Shewana3_3938	0.87	-2.3
4,734,695	-		Shewana3_3938	0.88	-0.4
4,734,731	+		Shewana3_3938	0.89	-0.1
4,734,754	-				-0.6
4,734,803	-				-0.5
4,734,914	-				+0.3
4,734,940	+				+0.2
4,734,983	-				+1.0
4,735,070	+				-0.1
4,735,071	+				+0.7
4,735,162	+				+0.2
4,735,464	-		Shewana3_3939	0.30	+0.7
4,735,488	-		Shewana3_3939	0.31	+0.8
4,735,554	-		Shewana3_3939	0.36	-1.6
4,735,591	+		Shewana3_3939	0.39	-0.3
4,735,650	-		Shewana3_3939	0.43	-0.4
4,735,720	-		Shewana3_3939	0.47	+0.1
4,735,761	+		Shewana3_3939	0.50	-0.3
4,735,838	+		Shewana3_3939	0.55	-1.2
4,735,896	-		Shewana3_3939	0.59	+1.0
4,735,898	-		Shewana3_3939	0.59	-2.5