Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3761

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,519,118	-		Shewana3_3760	0.26	-5.4
4,519,187	+		Shewana3_3760	0.33	-2.0
4,519,199	+		Shewana3_3760	0.34	-3.2
4,519,329	+		Shewana3_3760	0.46	-3.6
4,519,455	+		Shewana3_3760	0.57	-3.5
4,519,468	-		Shewana3_3760	0.58	-4.0
4,519,477	+		Shewana3_3760	0.59	-3.5
4,519,485	-		Shewana3_3760	0.60	-3.9
4,519,485	-		Shewana3_3760	0.60	-2.4
4,519,486	-		Shewana3_3760	0.60	-2.0
4,519,608	-		Shewana3_3760	0.71	-2.4
4,519,609	+		Shewana3_3760	0.71	-4.1
4,519,762	+		Shewana3_3760	0.85	-3.0
4,519,874	+				-3.3
4,519,888	-				-4.2
4,519,983	+				-6.1
4,520,081	-				-4.3
4,520,184	-		Shewana3_3761	0.13	-3.6
4,520,457	+		Shewana3_3761	0.31	-4.1
4,520,589	+		Shewana3_3761	0.39	-2.6
4,520,660	+		Shewana3_3761	0.44	-5.8
4,520,660	+		Shewana3_3761	0.44	-3.9
4,520,668	-		Shewana3_3761	0.44	-3.5
4,520,751	-		Shewana3_3761	0.50	-1.9
4,520,843	+		Shewana3_3761	0.55	-4.1
4,520,919	+		Shewana3_3761	0.60	-4.5
4,521,014	+		Shewana3_3761	0.66	-2.4
4,521,019	+		Shewana3_3761	0.67	-3.8
4,521,019	+		Shewana3_3761	0.67	-3.9
4,521,027	-		Shewana3_3761	0.67	-2.6
4,521,027	-		Shewana3_3761	0.67	-5.3
4,521,132	+		Shewana3_3761	0.74	-4.0
4,521,139	-		Shewana3_3761	0.74	-2.4
4,521,191	-		Shewana3_3761	0.78	-4.3
4,521,191	-		Shewana3_3761	0.78	-4.2
4,521,191	-		Shewana3_3761	0.78	-5.8
4,521,261	+		Shewana3_3761	0.82	-4.9
4,521,428	-				-4.4
4,521,670	-				-4.1
4,521,671	-				-1.7
4,522,225	-		Shewana3_3762	0.10	-0.5
4,522,248	-		Shewana3_3762	0.12	+1.6
4,522,305	-		Shewana3_3762	0.15	-0.2
4,522,315	-		Shewana3_3762	0.16	-0.2
4,522,317	+		Shewana3_3762	0.16	-0.3
4,522,447	+		Shewana3_3762	0.23	-1.7