Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3617 and Shewana3_3618 are separated by 2 nucleotides Shewana3_3618 and Shewana3_3619 are separated by 12 nucleotides
Shewana3_3617: Shewana3_3617 - polysulphide reductase, NrfD (RefSeq), at 4,343,480 to 4,344,424
_3617
Shewana3_3618: Shewana3_3618 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq), at 4,344,427 to 4,344,993
_3618
Shewana3_3619: Shewana3_3619 - molybdopterin oxidoreductase (RefSeq), at 4,345,006 to 4,347,300
_3619
Position (kb) 4344
4345 Strain fitness (log2 ratio) -1
0
1 at 4343.492 kb on + strand at 4343.668 kb on + strand, within Shewana3_3617 at 4343.676 kb on - strand, within Shewana3_3617 at 4343.676 kb on - strand, within Shewana3_3617 at 4343.679 kb on + strand, within Shewana3_3617 at 4343.709 kb on + strand, within Shewana3_3617 at 4343.710 kb on + strand, within Shewana3_3617 at 4343.724 kb on + strand, within Shewana3_3617 at 4343.724 kb on + strand, within Shewana3_3617 at 4343.732 kb on - strand, within Shewana3_3617 at 4343.732 kb on - strand, within Shewana3_3617 at 4343.773 kb on + strand, within Shewana3_3617 at 4343.773 kb on + strand, within Shewana3_3617 at 4343.773 kb on + strand, within Shewana3_3617 at 4343.773 kb on + strand, within Shewana3_3617 at 4343.781 kb on - strand, within Shewana3_3617 at 4343.817 kb on + strand, within Shewana3_3617 at 4343.833 kb on - strand, within Shewana3_3617 at 4343.872 kb on - strand, within Shewana3_3617 at 4343.906 kb on + strand, within Shewana3_3617 at 4343.912 kb on - strand, within Shewana3_3617 at 4343.957 kb on - strand, within Shewana3_3617 at 4344.136 kb on + strand, within Shewana3_3617 at 4344.270 kb on - strand, within Shewana3_3617 at 4344.462 kb on + strand at 4344.469 kb on - strand at 4344.535 kb on - strand, within Shewana3_3618 at 4345.090 kb on + strand at 4345.098 kb on - strand at 4345.160 kb on + strand at 4345.160 kb on + strand at 4345.362 kb on + strand, within Shewana3_3619 at 4345.444 kb on - strand, within Shewana3_3619 at 4345.451 kb on - strand, within Shewana3_3619 at 4345.543 kb on - strand, within Shewana3_3619 at 4345.598 kb on - strand, within Shewana3_3619 at 4345.701 kb on + strand, within Shewana3_3619 at 4345.709 kb on - strand, within Shewana3_3619 at 4345.789 kb on - strand, within Shewana3_3619 at 4345.885 kb on + strand, within Shewana3_3619 at 4345.885 kb on + strand, within Shewana3_3619 at 4345.885 kb on + strand, within Shewana3_3619
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 4,343,492 + -0.3 4,343,668 + Shewana3_3617 0.20 +1.0 4,343,676 - Shewana3_3617 0.21 +0.5 4,343,676 - Shewana3_3617 0.21 +0.7 4,343,679 + Shewana3_3617 0.21 -0.6 4,343,709 + Shewana3_3617 0.24 -0.0 4,343,710 + Shewana3_3617 0.24 -0.7 4,343,724 + Shewana3_3617 0.26 +0.6 4,343,724 + Shewana3_3617 0.26 -0.8 4,343,732 - Shewana3_3617 0.27 +0.0 4,343,732 - Shewana3_3617 0.27 -0.4 4,343,773 + Shewana3_3617 0.31 -0.5 4,343,773 + Shewana3_3617 0.31 +0.4 4,343,773 + Shewana3_3617 0.31 -0.0 4,343,773 + Shewana3_3617 0.31 +0.1 4,343,781 - Shewana3_3617 0.32 +0.0 4,343,817 + Shewana3_3617 0.36 +0.0 4,343,833 - Shewana3_3617 0.37 -1.4 4,343,872 - Shewana3_3617 0.41 +0.3 4,343,906 + Shewana3_3617 0.45 -0.0 4,343,912 - Shewana3_3617 0.46 -0.1 4,343,957 - Shewana3_3617 0.50 +0.1 4,344,136 + Shewana3_3617 0.69 -0.3 4,344,270 - Shewana3_3617 0.84 +0.1 4,344,462 + -0.2 4,344,469 - -0.0 4,344,535 - Shewana3_3618 0.19 +1.1 4,345,090 + -0.0 4,345,098 - +1.0 4,345,160 + +0.7 4,345,160 + +1.0 4,345,362 + Shewana3_3619 0.16 +0.4 4,345,444 - Shewana3_3619 0.19 +0.5 4,345,451 - Shewana3_3619 0.19 +1.3 4,345,543 - Shewana3_3619 0.23 -0.0 4,345,598 - Shewana3_3619 0.26 -0.6 4,345,701 + Shewana3_3619 0.30 +0.4 4,345,709 - Shewana3_3619 0.31 -0.6 4,345,789 - Shewana3_3619 0.34 -0.7 4,345,885 + Shewana3_3619 0.38 +0.6 4,345,885 + Shewana3_3619 0.38 -0.0 4,345,885 + Shewana3_3619 0.38 +0.0
Or see this region's nucleotide sequence