Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3617

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,342,509	-				+0.6
4,342,672	-				-0.8
4,342,696	+		Shewana3_3616	0.11	-0.6
4,342,704	-		Shewana3_3616	0.12	+0.8
4,342,704	-		Shewana3_3616	0.12	-0.4
4,342,727	+		Shewana3_3616	0.15	+0.3
4,342,730	+		Shewana3_3616	0.16	+0.4
4,342,858	-		Shewana3_3616	0.33	-0.1
4,343,109	+		Shewana3_3616	0.67	+0.8
4,343,230	+		Shewana3_3616	0.83	+1.0
4,343,230	+		Shewana3_3616	0.83	-0.5
4,343,287	+				+0.1
4,343,287	+				-0.7
4,343,287	+				+0.1
4,343,287	+				-0.3
4,343,295	-				-2.0
4,343,295	-				+0.3
4,343,295	-				+0.5
4,343,311	+				+1.0
4,343,492	+				-0.3
4,343,668	+		Shewana3_3617	0.20	+1.0
4,343,676	-		Shewana3_3617	0.21	+0.5
4,343,676	-		Shewana3_3617	0.21	+0.7
4,343,679	+		Shewana3_3617	0.21	-0.6
4,343,709	+		Shewana3_3617	0.24	-0.0
4,343,710	+		Shewana3_3617	0.24	-0.7
4,343,724	+		Shewana3_3617	0.26	+0.6
4,343,724	+		Shewana3_3617	0.26	-0.8
4,343,732	-		Shewana3_3617	0.27	+0.0
4,343,732	-		Shewana3_3617	0.27	-0.4
4,343,773	+		Shewana3_3617	0.31	-0.5
4,343,773	+		Shewana3_3617	0.31	+0.4
4,343,773	+		Shewana3_3617	0.31	-0.0
4,343,773	+		Shewana3_3617	0.31	+0.1
4,343,781	-		Shewana3_3617	0.32	+0.0
4,343,817	+		Shewana3_3617	0.36	+0.0
4,343,833	-		Shewana3_3617	0.37	-1.4
4,343,872	-		Shewana3_3617	0.41	+0.3
4,343,906	+		Shewana3_3617	0.45	-0.0
4,343,912	-		Shewana3_3617	0.46	-0.1
4,343,957	-		Shewana3_3617	0.50	+0.1
4,344,136	+		Shewana3_3617	0.69	-0.3
4,344,270	-		Shewana3_3617	0.84	+0.1
4,344,462	+				-0.2
4,344,469	-				-0.0
4,344,535	-		Shewana3_3618	0.19	+1.1
4,345,090	+				-0.0
4,345,098	-				+1.0
4,345,160	+				+0.7
4,345,160	+				+1.0
4,345,362	+		Shewana3_3619	0.16	+0.4