Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3614

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,339,807	-	metL	Shewana3_3613	0.59	-0.4
4,339,938	-	metL	Shewana3_3613	0.64	-0.5
4,339,974	-	metL	Shewana3_3613	0.66	-0.6
4,339,983	+	metL	Shewana3_3613	0.66	+0.3
4,339,986	-	metL	Shewana3_3613	0.66	+1.1
4,339,991	-	metL	Shewana3_3613	0.66	-1.5
4,339,996	+	metL	Shewana3_3613	0.67	-0.6
4,340,106	+	metL	Shewana3_3613	0.71	+1.0
4,340,558	-				+0.1
4,340,563	-				+0.3
4,340,710	-				-0.9
4,340,835	-				-3.2
4,340,974	+		Shewana3_3614	0.14	-4.3
4,341,007	+		Shewana3_3614	0.17	-4.4
4,341,015	-		Shewana3_3614	0.18	-4.6
4,341,024	+		Shewana3_3614	0.18	-3.2
4,341,060	+		Shewana3_3614	0.21	-4.0
4,341,075	-		Shewana3_3614	0.23	-3.1
4,341,075	-		Shewana3_3614	0.23	-4.1
4,341,139	+		Shewana3_3614	0.28	-3.7
4,341,140	-		Shewana3_3614	0.28	-3.2
4,341,151	+		Shewana3_3614	0.29	-3.3
4,341,156	+		Shewana3_3614	0.30	-3.5
4,341,164	-		Shewana3_3614	0.30	-3.3
4,341,164	-		Shewana3_3614	0.30	-4.4
4,341,164	-		Shewana3_3614	0.30	-3.8
4,341,164	-		Shewana3_3614	0.30	-2.3
4,341,164	-		Shewana3_3614	0.30	-2.4
4,341,169	+		Shewana3_3614	0.31	-3.5
4,341,178	+		Shewana3_3614	0.31	-4.4
4,341,199	+		Shewana3_3614	0.33	-3.1
4,341,222	+		Shewana3_3614	0.35	-3.1
4,341,254	-		Shewana3_3614	0.38	-4.5
4,341,279	+		Shewana3_3614	0.40	-5.1
4,341,287	-		Shewana3_3614	0.41	-3.6
4,341,326	-		Shewana3_3614	0.44	-5.4
4,341,346	+		Shewana3_3614	0.46	-3.7
4,341,351	+		Shewana3_3614	0.46	-3.6
4,341,434	+		Shewana3_3614	0.53	-2.0
4,341,441	+		Shewana3_3614	0.54	-3.4
4,341,532	-		Shewana3_3614	0.61	-4.5
4,341,542	+		Shewana3_3614	0.62	-2.0
4,341,572	-		Shewana3_3614	0.65	-3.6
4,341,579	-		Shewana3_3614	0.65	-4.8
4,341,756	+		Shewana3_3614	0.80	+0.0
4,341,787	+		Shewana3_3614	0.83	-2.2
4,341,910	-				-3.0
4,341,939	+				-3.5
4,341,994	+				-3.6
4,342,141	+				-0.1
4,342,234	-		Shewana3_3615	0.13	-1.9
4,342,334	+		Shewana3_3615	0.45	-0.6
4,342,470	-		Shewana3_3615	0.88	-1.7
4,342,509	-				+0.6
4,342,672	-				-0.8
4,342,696	+		Shewana3_3616	0.11	-0.6
4,342,704	-		Shewana3_3616	0.12	+0.8
4,342,704	-		Shewana3_3616	0.12	-0.4
4,342,727	+		Shewana3_3616	0.15	+0.3
4,342,730	+		Shewana3_3616	0.16	+0.4
4,342,858	-		Shewana3_3616	0.33	-0.1