Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3499

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,197,328	-				-0.7
4,197,472	+				+0.9
4,197,499	+				-1.2
4,197,515	+				-0.6
4,197,525	-				+0.2
4,197,530	+				-0.5
4,197,533	-				-0.5
4,197,538	-				-0.5
4,197,540	+				-0.5
4,197,540	+				-0.4
4,197,548	-				-0.9
4,197,558	-				+0.2
4,197,558	-				-0.8
4,197,560	+				-0.8
4,197,560	+				+0.4
4,197,572	+				+0.1
4,197,607	-				+0.2
4,197,614	+				+0.5
4,197,638	-				-0.5
4,197,664	-				+0.5
4,197,740	-				+0.4
4,197,740	-				+0.5
4,197,742	-				+0.0
4,197,811	-				+1.0
4,197,818	+				-2.1
4,197,828	+				+0.9
4,197,828	+				+0.1
4,197,836	-				+0.3
4,197,836	-				-0.7
4,197,867	+				+0.4
4,197,869	+				+0.3
4,197,877	+				+0.4
4,197,959	+				+0.7
4,198,014	+				+0.3
4,198,014	+				-0.8
4,198,014	+				+0.6
4,198,014	+				+1.0
4,198,022	-				-0.2
4,198,022	-				+0.4
4,198,022	-				+1.9
4,198,022	-				-0.4
4,198,022	-				-1.0
4,198,023	-				-0.4
4,198,055	-				+0.2
4,198,090	+				+0.0
4,198,280	-				+0.0
4,198,280	-				-0.6
4,198,293	+				-1.0
4,198,313	+				-1.1
4,198,321	-				-2.0
4,198,424	-				-2.1
4,198,545	+		Shewana3_3499	0.10	-1.0
4,198,718	+		Shewana3_3499	0.16	-0.1
4,198,723	+		Shewana3_3499	0.17	-0.3
4,198,723	+		Shewana3_3499	0.17	-0.9
4,198,731	-		Shewana3_3499	0.17	-0.7
4,198,731	-		Shewana3_3499	0.17	-1.3
4,198,731	-		Shewana3_3499	0.17	-1.7
4,198,772	-		Shewana3_3499	0.18	-0.7
4,198,822	+		Shewana3_3499	0.20	-2.0
4,198,824	-		Shewana3_3499	0.20	-1.3
4,198,824	-		Shewana3_3499	0.20	-2.5
4,198,856	+		Shewana3_3499	0.21	-1.6
4,198,867	-		Shewana3_3499	0.22	-1.0
4,199,021	-		Shewana3_3499	0.27	-1.9
4,199,039	+		Shewana3_3499	0.28	-1.8
4,199,062	-		Shewana3_3499	0.28	-1.0
4,199,114	-		Shewana3_3499	0.30	-0.7
4,199,493	+		Shewana3_3499	0.43	-1.9
4,199,501	-		Shewana3_3499	0.44	-1.8
4,199,501	-		Shewana3_3499	0.44	-1.8
4,199,626	-		Shewana3_3499	0.48	-1.8
4,199,788	+		Shewana3_3499	0.53	-2.1
4,199,997	+		Shewana3_3499	0.61	-0.1
4,199,998	-		Shewana3_3499	0.61	-2.3
4,200,023	+		Shewana3_3499	0.62	-1.8
4,200,097	-		Shewana3_3499	0.64	-1.2
4,200,183	+		Shewana3_3499	0.67	-1.7
4,200,183	+		Shewana3_3499	0.67	-1.1
4,200,183	+		Shewana3_3499	0.67	-0.8
4,200,386	+		Shewana3_3499	0.74	-1.2
4,200,535	-		Shewana3_3499	0.79	-2.8
4,200,563	+		Shewana3_3499	0.80	-1.7
4,200,566	+		Shewana3_3499	0.80	-1.7
4,200,571	-		Shewana3_3499	0.81	-1.4
4,200,583	-		Shewana3_3499	0.81	-1.5
4,200,642	+		Shewana3_3499	0.83	-2.7
4,200,650	-		Shewana3_3499	0.83	-2.5
4,200,925	-				-2.1
4,200,930	+				-1.3
4,201,140	-				-2.0
4,201,237	-				-0.7
4,201,297	-		Shewana3_3500	0.11	-1.6
4,201,540	-		Shewana3_3500	0.73	-0.9
4,201,547	-		Shewana3_3500	0.75	-1.2
4,201,943	+	gcvT	Shewana3_3501	0.25	-0.6
4,202,126	+	gcvT	Shewana3_3501	0.42	-0.3