Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3498

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,194,536	-		Shewana3_3496	0.88	+0.3
4,194,536	-		Shewana3_3496	0.88	+0.7
4,194,536	-		Shewana3_3496	0.88	-0.6
4,194,543	-		Shewana3_3496	0.88	-0.0
4,194,787	-				-0.6
4,194,880	+				+0.9
4,194,888	-				+0.4
4,194,910	-				-0.1
4,195,130	+		Shewana3_3497	0.44	-0.0
4,195,156	-		Shewana3_3497	0.49	+0.0
4,195,215	+		Shewana3_3497	0.60	+0.6
4,195,233	-		Shewana3_3497	0.63	-0.2
4,195,233	-		Shewana3_3497	0.63	-0.7
4,195,233	-		Shewana3_3497	0.63	-1.3
4,195,250	+		Shewana3_3497	0.66	+0.1
4,195,362	+		Shewana3_3497	0.88	+0.8
4,195,471	-				+0.5
4,195,574	+				-0.8
4,195,574	+				+0.7
4,195,633	+				-0.6
4,195,697	-		Shewana3_3498	0.13	-0.4
4,196,012	+		Shewana3_3498	0.31	+0.5
4,196,154	-		Shewana3_3498	0.39	-0.2
4,196,154	-		Shewana3_3498	0.39	-0.6
4,196,233	-		Shewana3_3498	0.43	+0.0
4,196,253	-		Shewana3_3498	0.44	+0.9
4,196,305	+		Shewana3_3498	0.47	+0.1
4,196,306	+		Shewana3_3498	0.47	-0.6
4,196,460	+		Shewana3_3498	0.56	+0.5
4,196,468	-		Shewana3_3498	0.56	+0.1
4,196,759	-		Shewana3_3498	0.73	+0.7
4,196,813	+		Shewana3_3498	0.76	-0.8
4,196,981	+		Shewana3_3498	0.85	-0.7
4,197,114	+				+0.6
4,197,120	-				+0.2
4,197,130	-				+0.2
4,197,199	+				-1.1
4,197,227	-				+0.8
4,197,328	-				-0.7
4,197,472	+				+0.9
4,197,499	+				-1.2
4,197,515	+				-0.6
4,197,525	-				+0.2
4,197,530	+				-0.5
4,197,533	-				-0.5
4,197,538	-				-0.5
4,197,540	+				-0.5
4,197,540	+				-0.4
4,197,548	-				-0.9
4,197,558	-				+0.2
4,197,558	-				-0.8
4,197,560	+				-0.8
4,197,560	+				+0.4
4,197,572	+				+0.1
4,197,607	-				+0.2
4,197,614	+				+0.5
4,197,638	-				-0.5
4,197,664	-				+0.5
4,197,740	-				+0.4
4,197,740	-				+0.5
4,197,742	-				+0.0
4,197,811	-				+1.0
4,197,818	+				-2.1
4,197,828	+				+0.9
4,197,828	+				+0.1
4,197,836	-				+0.3
4,197,836	-				-0.7
4,197,867	+				+0.4
4,197,869	+				+0.3
4,197,877	+				+0.4
4,197,959	+				+0.7
4,198,014	+				+0.3
4,198,014	+				-0.8
4,198,014	+				+0.6
4,198,014	+				+1.0
4,198,022	-				-0.2
4,198,022	-				+0.4
4,198,022	-				+1.9
4,198,022	-				-0.4
4,198,022	-				-1.0
4,198,023	-				-0.4
4,198,055	-				+0.2
4,198,090	+				+0.0