Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3293

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,941,337	-	pbpG	Shewana3_3292	0.32	+0.7
3,941,457	+	pbpG	Shewana3_3292	0.44	+1.1
3,941,653	-	pbpG	Shewana3_3292	0.65	+0.1
3,941,653	-	pbpG	Shewana3_3292	0.65	+0.7
3,941,655	-	pbpG	Shewana3_3292	0.65	+1.1
3,941,712	+	pbpG	Shewana3_3292	0.71	+1.0
3,941,758	+	pbpG	Shewana3_3292	0.76	+0.7
3,941,760	+	pbpG	Shewana3_3292	0.76	+0.7
3,941,774	-	pbpG	Shewana3_3292	0.78	+0.2
3,941,886	+	pbpG	Shewana3_3292	0.89	+0.5
3,941,934	+				+0.2
3,941,981	-				+0.9
3,942,101	+				-0.3
3,942,334	+				+0.3
3,942,342	-				+0.1
3,942,342	-				-0.9
3,942,342	-				-0.2
3,942,514	-		Shewana3_3293	0.25	-0.7
3,942,598	+		Shewana3_3293	0.34	+0.5
3,942,719	-		Shewana3_3293	0.47	-0.8
3,942,742	-		Shewana3_3293	0.50	-0.2
3,942,765	+		Shewana3_3293	0.52	-0.9
3,942,908	+		Shewana3_3293	0.68	+0.2
3,942,999	+		Shewana3_3293	0.78	-0.4
3,943,064	+		Shewana3_3293	0.85	+0.5
3,943,117	-				-0.6
3,943,187	-				+0.7
3,943,202	+				+0.9
3,943,296	+				+0.9
3,943,357	-				+1.1
3,943,453	-		Shewana3_3294	0.16	-0.8
3,943,463	-		Shewana3_3294	0.18	-0.6
3,943,523	+		Shewana3_3294	0.30	-2.4
3,943,523	+		Shewana3_3294	0.30	-0.8
3,943,523	+		Shewana3_3294	0.30	-0.6
3,943,526	-		Shewana3_3294	0.30	-0.8
3,943,526	-		Shewana3_3294	0.30	+0.4
3,943,526	-		Shewana3_3294	0.30	+0.2
3,943,531	-		Shewana3_3294	0.31	-0.8
3,943,531	-		Shewana3_3294	0.31	-0.2
3,943,555	-		Shewana3_3294	0.36	-0.2
3,943,632	-		Shewana3_3294	0.51	-0.3
3,943,633	-		Shewana3_3294	0.51	-0.4
3,943,642	+		Shewana3_3294	0.53	+0.7
3,943,670	+		Shewana3_3294	0.59	-1.0
3,943,676	-		Shewana3_3294	0.60	+0.0
3,943,687	+		Shewana3_3294	0.62	-0.0
3,943,840	+				+0.2
3,943,845	+				+0.8
3,943,848	-				+0.6
3,943,851	+				+0.3
3,943,853	-				+0.4
3,943,859	-				-0.4
3,943,976	+				-0.9
3,943,994	-				-1.6
3,944,044	+				-0.2
3,944,156	+				+0.5
3,944,156	+				-0.6
3,944,156	+				+0.1
3,944,158	-				+0.1
3,944,163	-				-1.0
3,944,164	-				-0.5
3,944,164	-				-0.0
3,944,191	+				-0.3
3,944,199	-				+0.8