Strain Fitness in Shewanella sp. ANA-3 around Shewana3_R0117
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
3,701,881 | + | -0.4 | |||
3,701,996 | + | +0.4 | |||
3,701,996 | + | -0.7 | |||
3,701,996 | + | +0.0 | |||
3,701,996 | + | +0.8 | |||
3,701,996 | + | -0.7 | |||
3,702,004 | - | -0.1 | |||
3,702,004 | - | -0.8 | |||
3,702,004 | - | +0.9 | |||
3,702,004 | - | -0.2 | |||
3,702,004 | - | -0.2 | |||
3,702,076 | + | +0.2 | |||
3,702,298 | + | Shewana3_3088 | 0.13 | +0.1 | |
3,702,354 | - | Shewana3_3088 | 0.16 | -1.1 | |
3,702,644 | - | Shewana3_3088 | 0.30 | +1.1 |
Or see this region's nucleotide sequence