Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3006
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
3,610,110 | - | -0.4 | |||
3,610,336 | + | Shewana3_3006 | 0.10 | -0.3 | |
3,610,448 | - | Shewana3_3006 | 0.18 | -0.6 | |
3,610,619 | + | Shewana3_3006 | 0.29 | -1.7 | |
3,610,619 | + | Shewana3_3006 | 0.29 | -2.4 | |
3,610,875 | + | Shewana3_3006 | 0.46 | -2.2 | |
3,610,985 | + | Shewana3_3006 | 0.53 | -2.4 | |
3,611,226 | - | Shewana3_3006 | 0.69 | -1.7 | |
3,611,258 | + | Shewana3_3006 | 0.72 | -2.9 | |
3,611,354 | + | Shewana3_3006 | 0.78 | -1.7 | |
3,611,449 | + | Shewana3_3006 | 0.84 | -1.3 | |
3,611,575 | - | -0.1 | |||
3,611,588 | + | -0.8 | |||
3,611,588 | + | -0.8 | |||
3,611,921 | + | -3.9 | |||
3,611,956 | - | -5.7 | |||
3,612,043 | - | -4.6 | |||
3,612,064 | - | -4.0 | |||
3,612,071 | + | -3.7 | |||
3,612,106 | + | -4.4 | |||
3,612,113 | + | -5.0 | |||
3,612,121 | - | -3.7 | |||
3,612,538 | - | Shewana3_3007 | 0.26 | -4.7 |
Or see this region's nucleotide sequence