Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2881

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,444,806	-		Shewana3_2880	0.32	+1.1
3,444,907	+		Shewana3_2880	0.43	-0.2
3,444,955	-		Shewana3_2880	0.48	+0.9
3,445,040	-		Shewana3_2880	0.57	+0.7
3,445,054	-		Shewana3_2880	0.59	-0.1
3,445,088	-		Shewana3_2880	0.62	-0.4
3,445,223	+		Shewana3_2880	0.77	+0.9
3,445,229	-		Shewana3_2880	0.77	+0.1
3,445,374	+				+0.7
3,445,676	+				-0.2
3,445,676	+				+0.8
3,445,843	+	rdgC	Shewana3_2881	0.12	+1.5
3,445,843	+	rdgC	Shewana3_2881	0.12	+0.8
3,445,851	-	rdgC	Shewana3_2881	0.12	+0.2
3,445,897	-	rdgC	Shewana3_2881	0.17	+0.6
3,446,089	+	rdgC	Shewana3_2881	0.38	-0.3
3,446,120	+	rdgC	Shewana3_2881	0.42	+1.1
3,446,210	-	rdgC	Shewana3_2881	0.52	+0.3
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.8
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.7
3,446,289	+	rdgC	Shewana3_2881	0.60	-0.3
3,446,297	-	rdgC	Shewana3_2881	0.61	-0.4
3,446,413	+	rdgC	Shewana3_2881	0.74	+0.4
3,446,612	+				+0.3
3,446,629	+				+0.4
3,446,637	-				+0.7
3,446,666	+				-0.1
3,446,675	+				+0.1
3,446,675	+				-0.1
3,447,224	-		Shewana3_2882	0.20	+0.7
3,447,380	+		Shewana3_2882	0.28	-0.9
3,447,410	-		Shewana3_2882	0.30	+0.2
3,447,423	-		Shewana3_2882	0.31	-0.6
3,447,430	+		Shewana3_2882	0.31	+0.7
3,447,454	+		Shewana3_2882	0.32	-0.9
3,447,570	-		Shewana3_2882	0.39	-0.8
3,447,575	+		Shewana3_2882	0.39	-1.0
3,447,575	+		Shewana3_2882	0.39	-0.8
3,447,583	-		Shewana3_2882	0.39	+1.4
3,447,616	+		Shewana3_2882	0.41	+0.2