Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2792
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
3,331,004 | - | +0.0 | |||
3,331,064 | - | -4.5 | |||
3,331,165 | + | Shewana3_2791 | 0.22 | -3.6 | |
3,331,173 | - | Shewana3_2791 | 0.23 | -3.7 | |
3,331,916 | - | Shewana3_2792 | 0.46 | -0.1 | |
3,332,130 | + | +0.6 | |||
3,332,180 | - | -0.8 | |||
3,332,211 | - | -0.5 | |||
3,332,245 | - | -0.1 | |||
3,332,278 | + | Shewana3_2793 | 0.13 | +0.0 | |
3,332,431 | + | Shewana3_2793 | 0.27 | -0.7 | |
3,332,639 | - | Shewana3_2793 | 0.46 | +0.2 | |
3,332,644 | - | Shewana3_2793 | 0.46 | -0.5 | |
3,332,653 | + | Shewana3_2793 | 0.47 | -3.7 | |
3,332,688 | + | Shewana3_2793 | 0.50 | +1.5 | |
3,332,732 | - | Shewana3_2793 | 0.54 | +0.1 | |
3,332,809 | + | Shewana3_2793 | 0.61 | -0.7 | |
3,332,935 | + | Shewana3_2793 | 0.73 | +1.0 | |
3,332,966 | - | Shewana3_2793 | 0.76 | +0.3 |
Or see this region's nucleotide sequence