Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2549
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
3,046,999 | - | -0.1 | |||
3,048,293 | + | asnB | Shewana3_2549 | 0.41 | -4.2 |
3,048,487 | - | asnB | Shewana3_2549 | 0.53 | -3.8 |
3,049,015 | + | asnB | Shewana3_2549 | 0.84 | -0.7 |
3,049,210 | + | -3.7 | |||
3,049,461 | + | -0.9 | |||
3,049,521 | - | +0.1 | |||
3,049,637 | + | Shewana3_2550 | 0.21 | +0.3 | |
3,049,677 | - | Shewana3_2550 | 0.25 | +0.3 | |
3,049,980 | - | Shewana3_2550 | 0.55 | -0.2 |
Or see this region's nucleotide sequence