Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2546
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
3,042,819 | - | Shewana3_2545 | 0.11 | -2.7 | |
3,043,003 | + | Shewana3_2545 | 0.28 | -3.9 | |
3,043,696 | + | -1.9 | |||
3,043,725 | + | -3.4 | |||
3,043,756 | - | -1.4 | |||
3,043,758 | + | -1.1 | |||
3,043,826 | + | purN | Shewana3_2546 | 0.13 | -2.7 |
3,044,089 | + | purN | Shewana3_2546 | 0.53 | -2.4 |
3,044,172 | + | purN | Shewana3_2546 | 0.66 | -2.5 |
3,044,278 | + | purN | Shewana3_2546 | 0.83 | -3.4 |
3,044,307 | + | purN | Shewana3_2546 | 0.87 | -2.9 |
3,044,315 | - | purN | Shewana3_2546 | 0.88 | -2.8 |
3,044,675 | - | Shewana3_2547 | 0.20 | -0.3 | |
3,044,816 | - | Shewana3_2547 | 0.39 | +0.7 | |
3,045,074 | + | Shewana3_2547 | 0.73 | -0.6 | |
3,045,172 | - | Shewana3_2547 | 0.86 | -0.1 | |
3,045,300 | + | -0.8 |
Or see this region's nucleotide sequence