Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1777
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
2,090,847 | + | Shewana3_1775 | 0.30 | -0.3 | |
2,090,875 | - | Shewana3_1775 | 0.39 | +0.6 | |
2,091,269 | - | Shewana3_1776 | 0.43 | -1.8 | |
2,091,281 | + | Shewana3_1776 | 0.46 | +0.3 | |
2,091,281 | + | Shewana3_1776 | 0.46 | +0.7 | |
2,091,281 | + | Shewana3_1776 | 0.46 | +0.8 | |
2,091,567 | + | +0.1 | |||
2,091,586 | - | -0.3 | |||
2,091,629 | - | -1.3 | |||
2,091,725 | + | -0.9 | |||
2,091,954 | + | Shewana3_1777 | 0.23 | -1.4 | |
2,092,047 | + | Shewana3_1777 | 0.37 | -1.3 | |
2,092,076 | + | Shewana3_1777 | 0.42 | -1.8 | |
2,092,402 | + | -0.5 | |||
2,092,851 | + | Shewana3_1778 | 0.18 | -1.1 | |
2,092,889 | + | Shewana3_1778 | 0.20 | -0.2 |
Or see this region's nucleotide sequence