Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1625
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
1,913,541 | + | Shewana3_1624 | 0.87 | -0.5 | |
1,913,894 | - | +0.9 | |||
1,914,012 | + | +0.6 | |||
1,914,371 | - | Shewana3_1625 | 0.30 | -0.7 | |
1,914,473 | - | Shewana3_1625 | 0.40 | +0.8 | |
1,914,884 | + | Shewana3_1625 | 0.84 | -0.6 | |
1,914,892 | - | Shewana3_1625 | 0.85 | -0.3 | |
1,914,922 | - | Shewana3_1625 | 0.88 | -0.1 | |
1,914,939 | + | -0.7 | |||
1,914,982 | - | +0.3 | |||
1,914,982 | - | +0.9 | |||
1,915,904 | + | +0.3 | |||
1,915,920 | - | +0.6 | |||
1,915,922 | + | +0.3 |
Or see this region's nucleotide sequence