Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1519

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,768,702	+				-3.4
1,768,748	-				-3.6
1,768,751	+				-3.8
1,768,804	-	trpD	Shewana3_1518	0.14	-4.4
1,769,126	+	trpD	Shewana3_1518	0.45	-4.1
1,769,126	+	trpD	Shewana3_1518	0.45	-3.9
1,769,126	+	trpD	Shewana3_1518	0.45	-3.7
1,769,255	-	trpD	Shewana3_1518	0.57	-3.9
1,769,604	+				-3.4
1,769,612	+				-4.6
1,769,612	-				-2.2
1,769,641	+				-3.8
1,769,641	+				-3.5
1,769,649	-				-4.0
1,769,649	-				-2.8
1,769,716	+				-4.2
1,769,745	-				-1.2
1,769,759	-				-0.9
1,769,780	-		Shewana3_1519	0.13	-1.4
1,769,780	-		Shewana3_1519	0.13	-3.6
1,769,873	+		Shewana3_1519	0.28	-2.8
1,769,954	+		Shewana3_1519	0.42	-3.8
1,770,050	-		Shewana3_1519	0.57	-3.1
1,770,058	-		Shewana3_1519	0.59	-3.5
1,770,118	+		Shewana3_1519	0.69	-3.0
1,770,149	+		Shewana3_1519	0.74	-3.5
1,770,152	-		Shewana3_1519	0.74	-3.1
1,770,380	-				+0.5
1,770,486	-				+0.3
1,770,491	-		Shewana3_1520	0.10	-2.1
1,770,527	-		Shewana3_1520	0.12	-5.4
1,770,551	+		Shewana3_1520	0.14	-4.5
1,770,617	-		Shewana3_1520	0.18	-4.6
1,770,624	+		Shewana3_1520	0.18	-4.1
1,770,632	+		Shewana3_1520	0.18	-3.0
1,770,705	-		Shewana3_1520	0.23	-4.2
1,770,732	-		Shewana3_1520	0.24	-3.8
1,770,924	+		Shewana3_1520	0.36	-3.9
1,770,950	+		Shewana3_1520	0.37	-3.1
1,771,031	+		Shewana3_1520	0.42	-4.0
1,771,062	+		Shewana3_1520	0.44	-3.0
1,771,079	+		Shewana3_1520	0.45	-3.8
1,771,087	-		Shewana3_1520	0.45	-4.2
1,771,112	-		Shewana3_1520	0.47	-3.0
1,771,112	-		Shewana3_1520	0.47	-3.8
1,771,112	-		Shewana3_1520	0.47	+1.3
1,771,112	-		Shewana3_1520	0.47	-3.6
1,771,212	-		Shewana3_1520	0.53	-3.6
1,771,253	+		Shewana3_1520	0.55	-4.8