Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1515

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,764,179	+		Shewana3_1514	0.29	-0.3
1,764,237	-		Shewana3_1514	0.34	+0.5
1,764,297	+		Shewana3_1514	0.40	-0.4
1,764,305	-		Shewana3_1514	0.41	+0.2
1,764,333	-		Shewana3_1514	0.43	+1.0
1,764,630	+		Shewana3_1514	0.71	+2.1
1,764,638	-		Shewana3_1514	0.72	-1.4
1,764,834	+				+0.5
1,764,882	-				+0.5
1,764,926	+				+0.6
1,764,949	+				-0.0
1,765,010	-				-2.7
1,765,316	-	trpA	Shewana3_1515	0.34	-3.7
1,765,398	-	trpA	Shewana3_1515	0.44	-3.6
1,765,497	+	trpA	Shewana3_1515	0.56	-5.5
1,765,618	+	trpA	Shewana3_1515	0.70	-4.2
1,765,633	+	trpA	Shewana3_1515	0.72	-4.4
1,765,633	+	trpA	Shewana3_1515	0.72	-2.5
1,765,769	+	trpA	Shewana3_1515	0.88	-3.4
1,765,860	+				-2.0
1,766,021	+		Shewana3_1516	0.13	-3.3
1,766,063	-		Shewana3_1516	0.16	-5.9
1,766,289	+		Shewana3_1516	0.35	-3.2
1,766,306	-		Shewana3_1516	0.37	-4.3
1,766,657	+		Shewana3_1516	0.66	-3.1
1,766,665	-		Shewana3_1516	0.67	-4.1
1,766,665	-		Shewana3_1516	0.67	-4.3
1,766,693	+		Shewana3_1516	0.69	-4.6
1,766,714	+		Shewana3_1516	0.71	-3.4
1,766,805	+		Shewana3_1516	0.78	-4.9