Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1300

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,512,844	-		Shewana3_1299	0.34	+0.2
1,512,962	+		Shewana3_1299	0.55	+0.2
1,513,029	+		Shewana3_1299	0.67	+0.6
1,513,136	+		Shewana3_1299	0.86	+0.2
1,513,338	-				+0.7
1,513,340	+				+1.0
1,513,660	-		Shewana3_1300	0.42	-1.0
1,513,747	+		Shewana3_1300	0.60	-0.9
1,513,859	-		Shewana3_1300	0.84	-1.2
1,513,919	+				-0.8
1,513,919	+				+0.1
1,513,927	-				-0.7
1,513,976	+				+0.2
1,513,992	-				+0.3
1,514,267	+				+0.6
1,514,267	+				-0.1
1,514,267	+				-0.3
1,514,275	-				+0.3
1,514,275	-				+1.0
1,514,275	-				-0.2
1,514,275	-				+0.0
1,514,275	-				-1.0
1,514,305	-		Shewana3_1301	0.11	+0.1
1,514,396	-		Shewana3_1301	0.14	+0.6
1,514,415	-		Shewana3_1301	0.15	+0.9
1,514,416	+		Shewana3_1301	0.15	+1.1
1,514,424	+		Shewana3_1301	0.15	-0.5
1,514,430	+		Shewana3_1301	0.16	+0.5
1,514,436	+		Shewana3_1301	0.16	+1.4
1,514,438	-		Shewana3_1301	0.16	+0.5
1,514,444	-		Shewana3_1301	0.16	+1.4
1,514,458	+		Shewana3_1301	0.17	+0.4
1,514,461	-		Shewana3_1301	0.17	-0.7
1,514,461	-		Shewana3_1301	0.17	+0.3
1,514,486	+		Shewana3_1301	0.18	-0.2
1,514,493	+		Shewana3_1301	0.18	-1.2
1,514,524	+		Shewana3_1301	0.19	+0.6
1,514,524	+		Shewana3_1301	0.19	+0.9
1,514,524	+		Shewana3_1301	0.19	-0.3
1,514,524	+		Shewana3_1301	0.19	-0.6
1,514,524	+		Shewana3_1301	0.19	+0.3
1,514,525	+		Shewana3_1301	0.19	-0.1
1,514,532	-		Shewana3_1301	0.20	+0.7
1,514,532	-		Shewana3_1301	0.20	-0.4
1,514,553	+		Shewana3_1301	0.21	-0.3
1,514,553	+		Shewana3_1301	0.21	+1.0
1,514,553	+		Shewana3_1301	0.21	+0.8
1,514,555	+		Shewana3_1301	0.21	-1.4
1,514,563	+		Shewana3_1301	0.21	+1.4
1,514,606	+		Shewana3_1301	0.23	+0.5
1,514,606	+		Shewana3_1301	0.23	+1.0
1,514,614	-		Shewana3_1301	0.23	+0.3
1,514,620	+		Shewana3_1301	0.23	+0.5
1,514,620	+		Shewana3_1301	0.23	+1.0
1,514,620	+		Shewana3_1301	0.23	-0.3
1,514,628	-		Shewana3_1301	0.24	-0.1
1,514,628	-		Shewana3_1301	0.24	-0.0
1,514,628	-		Shewana3_1301	0.24	+1.3
1,514,628	-		Shewana3_1301	0.24	-1.3
1,514,628	-				-1.8
1,514,628	-		Shewana3_1301	0.24	+1.1
1,514,630	-		Shewana3_1301	0.24	+0.1
1,514,634	+		Shewana3_1301	0.24	+0.5
1,514,635	+		Shewana3_1301	0.24	+0.4
1,514,642	-		Shewana3_1301	0.24	+1.7
1,514,643	-		Shewana3_1301	0.24	-0.9
1,514,643	-		Shewana3_1301	0.24	+0.3
1,514,643	-		Shewana3_1301	0.24	-0.2
1,514,643	-		Shewana3_1301	0.24	+0.5
1,514,643	-		Shewana3_1301	0.24	+0.7
1,514,648	-		Shewana3_1301	0.24	+0.6
1,514,654	+		Shewana3_1301	0.25	+0.9
1,514,655	+		Shewana3_1301	0.25	+0.8
1,514,662	-		Shewana3_1301	0.25	+0.1
1,514,663	-		Shewana3_1301	0.25	-0.7
1,514,673	-		Shewana3_1301	0.25	+0.2
1,514,677	-		Shewana3_1301	0.26	-0.3
1,514,724	+		Shewana3_1301	0.28	+0.0
1,514,732	-		Shewana3_1301	0.28	+0.1
1,514,794	-		Shewana3_1301	0.30	+0.1
1,514,799	-		Shewana3_1301	0.31	+0.9
1,514,802	-		Shewana3_1301	0.31	+0.8
1,514,804	+				-2.1
1,514,806	+		Shewana3_1301	0.31	-0.3
1,514,829	+		Shewana3_1301	0.32	-0.7
1,514,851	+		Shewana3_1301	0.33	+0.8
1,514,851	+		Shewana3_1301	0.33	-0.3
1,514,878	-		Shewana3_1301	0.34	+0.5