Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1240

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,449,634	+		Shewana3_1239	0.64	-0.7
1,449,642	-		Shewana3_1239	0.65	+0.8
1,449,642	-		Shewana3_1239	0.65	-0.1
1,449,642	-		Shewana3_1239	0.65	+0.4
1,449,912	+		Shewana3_1239	0.83	-0.6
1,449,920	-		Shewana3_1239	0.84	-0.2
1,449,989	+		Shewana3_1239	0.89	+2.0
1,450,332	+				+0.0
1,450,387	+				-1.0
1,450,572	-				-1.8
1,450,604	+				-2.9
1,450,733	-				-4.1
1,450,816	+				-3.6
1,450,944	+		Shewana3_1240	0.13	-2.3
1,451,058	+		Shewana3_1240	0.16	-3.0
1,451,066	-		Shewana3_1240	0.16	-2.6
1,451,066	-		Shewana3_1240	0.16	-0.9
1,451,124	+		Shewana3_1240	0.18	-3.9
1,451,219	-		Shewana3_1240	0.20	-1.2
1,451,247	+		Shewana3_1240	0.21	-2.2
1,451,265	-		Shewana3_1240	0.22	+0.4
1,451,275	+		Shewana3_1240	0.22	-2.4
1,451,403	+		Shewana3_1240	0.25	-3.3
1,451,864	+		Shewana3_1240	0.37	-4.1
1,451,864	+		Shewana3_1240	0.37	-1.9
1,451,872	-		Shewana3_1240	0.37	-2.3
1,451,946	+		Shewana3_1240	0.39	-5.5
1,452,268	-		Shewana3_1240	0.47	-2.7
1,452,271	-		Shewana3_1240	0.47	-0.9
1,452,296	+		Shewana3_1240	0.48	-3.7
1,452,341	+		Shewana3_1240	0.49	-4.3
1,452,392	+		Shewana3_1240	0.51	-2.5
1,452,716	+		Shewana3_1240	0.59	-2.3
1,452,843	+		Shewana3_1240	0.62	-2.7
1,452,877	-		Shewana3_1240	0.63	-3.5
1,452,973	+		Shewana3_1240	0.66	-4.6
1,453,009	+		Shewana3_1240	0.66	-2.7
1,453,177	-		Shewana3_1240	0.71	-3.1
1,453,349	-		Shewana3_1240	0.75	-2.7
1,453,363	-		Shewana3_1240	0.76	-3.9
1,453,377	+		Shewana3_1240	0.76	-3.4
1,453,414	+		Shewana3_1240	0.77	-3.7
1,453,476	-		Shewana3_1240	0.78	-4.0
1,453,622	+		Shewana3_1240	0.82	-4.4
1,453,667	-		Shewana3_1240	0.83	-1.7
1,453,718	+		Shewana3_1240	0.85	-3.6
1,453,737	-		Shewana3_1240	0.85	-3.7
1,453,745	+		Shewana3_1240	0.85	-2.8
1,453,745	+		Shewana3_1240	0.85	-3.5
1,453,832	-		Shewana3_1240	0.88	-2.1
1,453,832	-		Shewana3_1240	0.88	-4.0
1,453,832	-		Shewana3_1240	0.88	-1.7
1,453,832	-		Shewana3_1240	0.88	-3.4
1,453,942	+				-4.8
1,454,036	-				-0.2
1,454,210	-				-0.9
1,454,254	+				-3.5
1,454,254	+				-4.0
1,454,295	+				-4.6
1,454,477	+				-1.2
1,454,490	-				+0.1
1,454,674	-				+0.2
1,454,685	+				+1.8
1,454,685	+				+0.0
1,454,767	+				+0.1
1,454,826	-				-2.6
1,454,831	+				+0.3
1,454,839	-				+0.6
1,454,839	-				-0.0