Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1140

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,344,578	+	thrA	Shewana3_1139	0.71	-5.6
1,344,592	+	thrA	Shewana3_1139	0.72	-3.0
1,344,598	-	thrA	Shewana3_1139	0.72	-3.0
1,344,773	+	thrA	Shewana3_1139	0.79	-2.7
1,344,781	-	thrA	Shewana3_1139	0.79	-1.7
1,344,785	+	thrA	Shewana3_1139	0.79	-1.2
1,344,853	+	thrA	Shewana3_1139	0.82	-3.1
1,345,043	+	thrA	Shewana3_1139	0.90	-2.9
1,345,070	+				-2.5
1,345,132	+				-4.4
1,345,293	-				-2.1
1,345,820	-		Shewana3_1140	0.57	-3.3
1,345,928	+		Shewana3_1140	0.68	-2.3
1,345,935	+		Shewana3_1140	0.69	-2.1
1,345,943	-		Shewana3_1140	0.70	-4.4
1,345,970	+		Shewana3_1140	0.73	-3.8
1,345,972	-		Shewana3_1140	0.73	-3.9
1,345,978	-		Shewana3_1140	0.73	-4.0
1,345,995	-		Shewana3_1140	0.75	-1.9
1,346,215	-				-4.0
1,346,252	+				-2.3
1,346,281	+				-3.3
1,346,362	+				-3.7
1,346,485	-		Shewana3_1141	0.15	-4.0
1,347,010	+		Shewana3_1141	0.56	-2.6
1,347,075	-		Shewana3_1141	0.61	-4.0
1,347,153	+		Shewana3_1141	0.67	-3.1
1,347,161	-		Shewana3_1141	0.68	-4.6