Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0864

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,005,446	+		Shewana3_0863	0.14	-4.5
1,005,602	-		Shewana3_0863	0.31	-4.1
1,005,607	+		Shewana3_0863	0.32	-3.7
1,005,646	-		Shewana3_0863	0.36	-3.3
1,005,744	-		Shewana3_0863	0.47	-4.7
1,005,827	+		Shewana3_0863	0.56	-4.4
1,005,827	+		Shewana3_0863	0.56	-3.0
1,006,180	+				-4.5
1,006,183	-				-5.3
1,006,440	+				-4.4
1,006,448	-				-1.2
1,006,568	+	cysN	Shewana3_0864	0.15	-1.9
1,006,622	-	cysN	Shewana3_0864	0.18	-3.2
1,006,791	+	cysN	Shewana3_0864	0.30	-4.4
1,006,791	+	cysN	Shewana3_0864	0.30	-0.8
1,006,882	+	cysN	Shewana3_0864	0.36	-3.1
1,007,048	-	cysN	Shewana3_0864	0.48	-4.2
1,007,048	-	cysN	Shewana3_0864	0.48	-2.8
1,007,050	+	cysN	Shewana3_0864	0.48	-3.4
1,007,050	+	cysN	Shewana3_0864	0.48	-3.8
1,007,241	-	cysN	Shewana3_0864	0.61	-4.4
1,007,346	+	cysN	Shewana3_0864	0.69	-3.0
1,007,346	+	cysN	Shewana3_0864	0.69	-3.0
1,007,346	+	cysN	Shewana3_0864	0.69	-4.0
1,007,352	-	cysN	Shewana3_0864	0.69	-3.0
1,007,435	-	cysN	Shewana3_0864	0.75	-3.3
1,007,444	-	cysN	Shewana3_0864	0.75	-4.1
1,007,466	-	cysN	Shewana3_0864	0.77	-3.8
1,007,558	+	cysN	Shewana3_0864	0.83	-1.6
1,007,558	+	cysN	Shewana3_0864	0.83	-4.8
1,007,558	+	cysN	Shewana3_0864	0.83	-2.0
1,007,558	+	cysN	Shewana3_0864	0.83	-2.3
1,007,566	-	cysN	Shewana3_0864	0.84	-3.2
1,007,709	+				-4.1
1,008,105	-		Shewana3_0865	0.18	-4.5
1,008,117	-		Shewana3_0865	0.18	-2.2
1,008,347	+		Shewana3_0865	0.32	-4.2
1,008,425	-		Shewana3_0865	0.36	-4.4
1,008,434	-		Shewana3_0865	0.37	-4.0
1,008,509	+		Shewana3_0865	0.41	-3.0
1,008,599	+		Shewana3_0865	0.46	-3.3
1,008,717	-		Shewana3_0865	0.53	-4.0
1,008,725	+		Shewana3_0865	0.53	-2.4