Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0731

Experiment: Carbon source Sucrose 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_0730 and Shewana3_0731 are separated by 52 nucleotidesShewana3_0731 and Shewana3_0732 overlap by 8 nucleotides Shewana3_0730: Shewana3_0730 - DNA topoisomerase IV subunit B (RefSeq), at 845,650 to 847,536 _0730 Shewana3_0731: Shewana3_0731 - L-sorbosone dehydrogenase, putative (RefSeq), at 847,589 to 848,764 _0731 Shewana3_0732: Shewana3_0732 - DNA topoisomerase IV subunit A (RefSeq), at 848,757 to 851,033 _0732 Position (kb) 847 848 849Strain fitness (log2 ratio) -1 0 1at 847.530 kb on + strandat 847.531 kb on + strandat 847.974 kb on + strand, within Shewana3_0731at 848.359 kb on + strand, within Shewana3_0731

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Per-strain Table

Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM
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847,530 + +0.7
847,531 + +0.1
847,974 + Shewana3_0731 0.33 -0.6
848,359 + Shewana3_0731 0.65 -0.7

Or see this region's nucleotide sequence