Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0069 and mogA are separated by 205 nucleotides mogA and Shewana3_0071 are separated by 33 nucleotides Shewana3_0071 and Shewana3_0072 are separated by 151 nucleotides
Shewana3_0069: Shewana3_0069 - Fructokinase (EC 2.7.1.4) (from data) , at 82,632 to 83,591
_0069
Shewana3_0070: mogA - molybdenum cofactor biosynthesis protein (RefSeq), at 83,797 to 84,330
mogA
Shewana3_0071: Shewana3_0071 - hypothetical protein (RefSeq), at 84,364 to 84,582
_0071
Shewana3_0072: Shewana3_0072 - transcriptional regulator (RefSeq), at 84,734 to 85,777
_0072
Position (kb)
83
84
85 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 83.234 kb on + strand, within Shewana3_0069 at 83.278 kb on + strand, within Shewana3_0069 at 83.311 kb on + strand, within Shewana3_0069 at 83.314 kb on - strand, within Shewana3_0069 at 83.321 kb on + strand, within Shewana3_0069 at 83.371 kb on - strand, within Shewana3_0069 at 83.428 kb on + strand, within Shewana3_0069 at 83.485 kb on + strand, within Shewana3_0069 at 83.490 kb on + strand, within Shewana3_0069 at 83.527 kb on - strand at 83.529 kb on + strand at 83.572 kb on + strand at 83.586 kb on + strand at 83.707 kb on + strand at 83.775 kb on - strand at 83.807 kb on - strand at 83.984 kb on - strand, within mogA at 84.034 kb on - strand, within mogA at 84.055 kb on - strand, within mogA at 84.082 kb on + strand, within mogA at 84.254 kb on + strand, within mogA at 84.268 kb on - strand, within mogA at 84.272 kb on - strand, within mogA at 84.460 kb on - strand, within Shewana3_0071 at 84.505 kb on + strand, within Shewana3_0071 at 84.505 kb on + strand, within Shewana3_0071 at 84.513 kb on - strand, within Shewana3_0071 at 84.541 kb on + strand, within Shewana3_0071 at 84.542 kb on - strand, within Shewana3_0071 at 84.566 kb on + strand at 84.569 kb on - strand at 84.584 kb on - strand at 84.592 kb on - strand at 84.849 kb on + strand, within Shewana3_0072 at 84.849 kb on + strand, within Shewana3_0072 at 84.912 kb on + strand, within Shewana3_0072 at 85.071 kb on + strand, within Shewana3_0072 at 85.194 kb on + strand, within Shewana3_0072 at 85.227 kb on - strand, within Shewana3_0072 at 85.268 kb on - strand, within Shewana3_0072 at 85.272 kb on + strand, within Shewana3_0072 at 85.304 kb on + strand, within Shewana3_0072
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 83,234 + Shewana3_0069 0.63 -2.5 83,278 + Shewana3_0069 0.67 -3.7 83,311 + Shewana3_0069 0.71 -2.3 83,314 - Shewana3_0069 0.71 -4.0 83,321 + Shewana3_0069 0.72 -2.7 83,371 - Shewana3_0069 0.77 -3.7 83,428 + Shewana3_0069 0.83 -4.0 83,485 + Shewana3_0069 0.89 -3.7 83,490 + Shewana3_0069 0.89 -5.6 83,527 - -2.8 83,529 + -3.3 83,572 + +2.3 83,586 + -0.4 83,707 + -0.2 83,775 - -1.5 83,807 - +1.3 83,984 - mogA Shewana3_0070 0.35 +0.2 84,034 - mogA Shewana3_0070 0.44 -0.5 84,055 - mogA Shewana3_0070 0.48 -1.2 84,082 + mogA Shewana3_0070 0.53 -0.7 84,254 + mogA Shewana3_0070 0.86 -1.6 84,268 - mogA Shewana3_0070 0.88 -2.1 84,272 - mogA Shewana3_0070 0.89 -2.1 84,460 - Shewana3_0071 0.44 +0.1 84,505 + Shewana3_0071 0.64 -0.6 84,505 + Shewana3_0071 0.64 +0.6 84,513 - Shewana3_0071 0.68 -0.6 84,541 + Shewana3_0071 0.81 -0.7 84,542 - Shewana3_0071 0.81 -0.6 84,566 + +0.7 84,569 - +0.1 84,584 - -0.3 84,592 - +0.2 84,849 + Shewana3_0072 0.11 +1.0 84,849 + Shewana3_0072 0.11 +1.3 84,912 + Shewana3_0072 0.17 +0.4 85,071 + Shewana3_0072 0.32 +0.3 85,194 + Shewana3_0072 0.44 -0.9 85,227 - Shewana3_0072 0.47 -0.1 85,268 - Shewana3_0072 0.51 -0.1 85,272 + Shewana3_0072 0.52 +0.8 85,304 + Shewana3_0072 0.55 -0.1
Or see this region's nucleotide sequence