Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08060

Experiment: Formate with hypochlorite 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS08050 and MMP_RS08055 are separated by 16 nucleotidesMMP_RS08055 and MMP_RS08060 are separated by 4 nucleotidesMMP_RS08060 and MMP_RS08065 are separated by 24 nucleotides MMP_RS08050: MMP_RS08050 - tetrahydromethanopterin S-methyltransferase subunit A, at 1,517,711 to 1,518,430 _RS08050 MMP_RS08055: MMP_RS08055 - tetrahydromethanopterin S-methyltransferase subunit A, at 1,518,447 to 1,519,208 _RS08055 MMP_RS08060: MMP_RS08060 - tetrahydromethanopterin S-methyltransferase subunit G, at 1,519,213 to 1,519,437 _RS08060 MMP_RS08065: MMP_RS08065 - tetrahydromethanopterin S-methyltransferase subunit H, at 1,519,462 to 1,520,421 _RS08065 Position (kb) 1519 1520Strain fitness (log2 ratio) -2 -1 0 1at 1518.362 kb on - strandat 1518.391 kb on + strandat 1520.424 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM
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1,518,362 - -1.8
1,518,391 + -1.8
1,520,424 + +0.4

Or see this region's nucleotide sequence