Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05950

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,140,462	-		MMP_RS05940	0.40	-0.1
1,140,632	+		MMP_RS05940	0.67	-0.0
1,140,686	+		MMP_RS05940	0.75	+0.2
1,140,697	+		MMP_RS05940	0.77	+0.1
1,140,697	+		MMP_RS05940	0.77	+0.2
1,140,781	+		MMP_RS05940	0.90	+0.0
1,140,828	-				+0.9
1,140,831	-				-0.1
1,140,885	+				+0.1
1,140,885	+				-0.2
1,140,886	-				-0.0
1,140,967	+				+0.5
1,140,967	+				-0.0
1,140,967	+				-0.5
1,140,967	+				-0.3
1,140,971	+				+0.1
1,141,146	+		MMP_RS05945	0.34	+0.2
1,141,301	+		MMP_RS05945	0.77	-0.5
1,141,302	-		MMP_RS05945	0.77	-0.3
1,141,317	+		MMP_RS05945	0.81	+0.1
1,141,317	+		MMP_RS05945	0.81	+0.1
1,141,377	+				+0.9
1,141,384	-				+0.1
1,141,385	+				-0.1
1,141,418	-				-0.1
1,141,418	-				-0.0
1,141,418	-				+0.1
1,141,421	-				+0.8
1,141,421	-				+0.3
1,141,421	-				+0.7
1,141,422	+				+0.5
1,141,423	-				+0.3
1,141,424	+				+0.0
1,141,425	-				-0.3
1,141,425	-				+0.2
1,141,425	-				+0.5
1,141,425	-				+0.0
1,141,425	-				+0.1
1,141,426	+				+0.7
1,141,426	+				+1.1
1,141,426	+				-0.4
1,141,429	-				-0.2
1,141,429	-				+0.8
1,141,430	+				-0.2
1,141,432	-				+0.1
1,141,486	+				-0.1
1,141,491	-				-0.0
1,141,610	+		MMP_RS05950	0.15	+0.2
1,141,640	-		MMP_RS05950	0.17	-0.3
1,141,716	+		MMP_RS05950	0.24	+0.5
1,141,716	+		MMP_RS05950	0.24	-0.2
1,141,762	-		MMP_RS05950	0.28	+0.3
1,141,798	+		MMP_RS05950	0.31	-0.1
1,141,862	-		MMP_RS05950	0.37	+0.3
1,141,927	-		MMP_RS05950	0.43	-0.3
1,141,941	-		MMP_RS05950	0.44	+0.4
1,142,042	-		MMP_RS05950	0.53	+1.5
1,142,063	+		MMP_RS05950	0.55	-0.2
1,142,089	+		MMP_RS05950	0.57	+0.4
1,142,188	+		MMP_RS05950	0.66	+0.4
1,142,251	+		MMP_RS05950	0.72	+0.5
1,142,401	+		MMP_RS05950	0.85	+1.0
1,142,466	-				+0.2
1,142,504	+				+0.2
1,142,533	+				+0.4
1,142,568	+				+0.4
1,142,619	+				+0.7
1,142,636	-				+0.6
1,142,650	+				-0.2
1,142,659	+				+0.5
1,142,665	-				+0.2
1,142,675	-				+0.4
1,142,679	-				+0.4
1,142,679	-				+0.1
1,142,679	-				-0.0
1,142,680	+				-0.2
1,142,688	+				+0.3
1,142,723	+				+0.5
1,142,725	-				-0.1
1,142,727	-				+0.1
1,142,729	-				+0.1
1,142,729	-				-0.3
1,142,730	+				-0.2
1,142,730	+				-0.1
1,142,746	-				-0.2
1,142,746	-				+0.1
1,142,747	+				+0.1
1,142,747	+				+0.6
1,142,747	+				-0.0
1,142,747	+				+0.1
1,142,748	-				+0.9
1,142,748	-				+0.3
1,142,749	+				-0.5
1,142,750	-				+0.1
1,142,751	+				+0.7
1,142,777	-				-0.3
1,143,032	-		MMP_RS05955	0.40	-1.2
1,143,098	+		MMP_RS05955	0.52	-0.7
1,143,486	+		MMP_RS05960	0.11	-0.1