Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05020
Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate with hypochlorite 5 mM |
---|---|---|---|---|---|
remove | |||||
954,979 | + | -0.5 | |||
955,060 | - | -2.7 | |||
955,394 | - | -2.9 | |||
955,394 | - | +0.5 | |||
955,401 | + | -2.9 | |||
955,554 | - | -1.0 | |||
955,927 | - | -0.9 | |||
955,932 | + | +0.0 | |||
956,053 | - | MMP_RS05020 | 0.35 | -1.2 | |
956,131 | - | MMP_RS05020 | 0.53 | -0.2 | |
956,174 | + | MMP_RS05020 | 0.64 | -0.6 | |
956,281 | - | MMP_RS05020 | 0.89 | -2.0 | |
956,281 | - | MMP_RS05020 | 0.89 | -0.7 | |
956,299 | - | -0.6 | |||
956,661 | - | -2.0 | |||
956,695 | + | -2.1 | |||
956,893 | - | -1.6 | |||
957,050 | - | -2.2 |
Or see this region's nucleotide sequence