Experiment: Formate with hypochlorite 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS01485 and MMP_RS01490 are separated by 24 nucleotides MMP_RS01490 and MMP_RS01495 are separated by 129 nucleotides
MMP_RS01485: MMP_RS01485 - right-handed parallel beta-helix repeat-containing protein, at 274,500 to 277,178
_RS01485
MMP_RS01490: MMP_RS01490 - tetratricopeptide repeat protein, at 277,203 to 278,237
_RS01490
MMP_RS01495: MMP_RS01495 - TraB/GumN family protein, at 278,367 to 279,509
_RS01495
Position (kb) 277
278
279 Strain fitness (log2 ratio) -1
0
1 at 276.295 kb on - strand, within MMP_RS01485 at 276.432 kb on - strand, within MMP_RS01485 at 276.474 kb on + strand, within MMP_RS01485 at 276.541 kb on - strand, within MMP_RS01485 at 276.561 kb on - strand, within MMP_RS01485 at 276.711 kb on + strand, within MMP_RS01485 at 276.744 kb on + strand, within MMP_RS01485 at 276.779 kb on - strand, within MMP_RS01485 at 276.805 kb on - strand, within MMP_RS01485 at 277.224 kb on + strand at 277.319 kb on + strand, within MMP_RS01490 at 277.540 kb on - strand, within MMP_RS01490 at 277.625 kb on + strand, within MMP_RS01490 at 277.685 kb on - strand, within MMP_RS01490 at 277.685 kb on - strand, within MMP_RS01490 at 277.800 kb on + strand, within MMP_RS01490 at 277.932 kb on - strand, within MMP_RS01490 at 277.950 kb on + strand, within MMP_RS01490 at 278.281 kb on + strand at 278.737 kb on + strand, within MMP_RS01495 at 278.766 kb on - strand, within MMP_RS01495 at 278.822 kb on - strand, within MMP_RS01495 at 278.895 kb on - strand, within MMP_RS01495 at 278.895 kb on - strand, within MMP_RS01495 at 278.896 kb on + strand, within MMP_RS01495 at 278.939 kb on - strand, within MMP_RS01495 at 278.939 kb on - strand, within MMP_RS01495 at 278.939 kb on - strand, within MMP_RS01495 at 278.941 kb on - strand, within MMP_RS01495 at 278.942 kb on + strand, within MMP_RS01495 at 278.942 kb on + strand, within MMP_RS01495 at 278.945 kb on - strand, within MMP_RS01495 at 278.946 kb on + strand, within MMP_RS01495
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with hypochlorite 5 mM remove 276,295 - MMP_RS01485 0.67 -0.9 276,432 - MMP_RS01485 0.72 +1.1 276,474 + MMP_RS01485 0.74 -0.2 276,541 - MMP_RS01485 0.76 +0.5 276,561 - MMP_RS01485 0.77 +0.2 276,711 + MMP_RS01485 0.83 +0.0 276,744 + MMP_RS01485 0.84 +0.6 276,779 - MMP_RS01485 0.85 +0.3 276,805 - MMP_RS01485 0.86 +0.2 277,224 + +1.2 277,319 + MMP_RS01490 0.11 +0.2 277,540 - MMP_RS01490 0.33 +0.1 277,625 + MMP_RS01490 0.41 +0.4 277,685 - MMP_RS01490 0.47 +0.3 277,685 - MMP_RS01490 0.47 +0.4 277,800 + MMP_RS01490 0.58 -0.9 277,932 - MMP_RS01490 0.70 +0.0 277,950 + MMP_RS01490 0.72 +0.1 278,281 + -0.2 278,737 + MMP_RS01495 0.32 -0.3 278,766 - MMP_RS01495 0.35 -0.7 278,822 - MMP_RS01495 0.40 -1.1 278,895 - MMP_RS01495 0.46 -0.3 278,895 - MMP_RS01495 0.46 -0.7 278,896 + MMP_RS01495 0.46 -0.3 278,939 - MMP_RS01495 0.50 -1.0 278,939 - MMP_RS01495 0.50 -0.1 278,939 - MMP_RS01495 0.50 +0.3 278,941 - MMP_RS01495 0.50 +0.2 278,942 + MMP_RS01495 0.50 -0.8 278,942 + MMP_RS01495 0.50 -0.3 278,945 - MMP_RS01495 0.51 -0.6 278,946 + MMP_RS01495 0.51 -0.6
Or see this region's nucleotide sequence