Experiment: ALP with sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2329 and Dsui_2330 are separated by 131 nucleotides Dsui_2330 and Dsui_2331 are separated by 97 nucleotides
Dsui_2329: Dsui_2329 - putative dehydrogenase, at 2,482,287 to 2,483,414
_2329
Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394
_2330
Dsui_2331: Dsui_2331 - heat shock protein, at 2,484,492 to 2,485,643
_2331
Position (kb)
2483
2484
2485 Strain fitness (log2 ratio)
-2
-1
0
1 at 2482.628 kb on + strand at 2482.671 kb on + strand at 2482.679 kb on - strand at 2482.795 kb on - strand, within Dsui_2329 at 2482.822 kb on + strand at 2482.971 kb on + strand at 2482.990 kb on + strand at 2483.082 kb on - strand at 2483.176 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand at 2483.196 kb on - strand, within Dsui_2329 at 2483.198 kb on + strand at 2483.475 kb on - strand at 2483.559 kb on - strand at 2483.630 kb on - strand at 2483.641 kb on - strand at 2483.691 kb on + strand, within Dsui_2330 at 2483.755 kb on + strand, within Dsui_2330 at 2483.780 kb on + strand, within Dsui_2330 at 2483.788 kb on - strand at 2483.788 kb on - strand, within Dsui_2330 at 2483.986 kb on - strand at 2484.055 kb on + strand at 2484.129 kb on - strand, within Dsui_2330 at 2484.228 kb on + strand, within Dsui_2330 at 2484.376 kb on + strand at 2484.387 kb on - strand at 2484.591 kb on + strand at 2484.599 kb on - strand at 2484.599 kb on - strand at 2484.996 kb on - strand, within Dsui_2331 at 2485.093 kb on + strand at 2485.167 kb on - strand, within Dsui_2331 at 2485.209 kb on + strand, within Dsui_2331 at 2485.243 kb on - strand, within Dsui_2331
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with sodium fluoride 40 mM remove 2,482,628 + -0.8 2,482,671 + +0.8 2,482,679 - +0.8 2,482,795 - Dsui_2329 0.45 -2.2 2,482,822 + +0.8 2,482,971 + -0.2 2,482,990 + -0.2 2,483,082 - -1.2 2,483,176 - Dsui_2329 0.79 -1.6 2,483,196 - Dsui_2329 0.81 -0.2 2,483,196 - +0.8 2,483,196 - Dsui_2329 0.81 +0.8 2,483,198 + -0.2 2,483,475 - +0.8 2,483,559 - -0.2 2,483,630 - -0.2 2,483,641 - +0.8 2,483,691 + Dsui_2330 0.17 -0.2 2,483,755 + Dsui_2330 0.25 -0.8 2,483,780 + Dsui_2330 0.28 -2.0 2,483,788 - -0.2 2,483,788 - Dsui_2330 0.29 -0.2 2,483,986 - +0.8 2,484,055 + +0.8 2,484,129 - Dsui_2330 0.69 -1.2 2,484,228 + Dsui_2330 0.80 -1.6 2,484,376 + -2.0 2,484,387 - +0.8 2,484,591 + -1.2 2,484,599 - -1.0 2,484,599 - -0.2 2,484,996 - Dsui_2331 0.44 -0.1 2,485,093 + +0.8 2,485,167 - Dsui_2331 0.59 -0.4 2,485,209 + Dsui_2331 0.62 -0.2 2,485,243 - Dsui_2331 0.65 +1.0
Or see this region's nucleotide sequence