Experiment: ALP with sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0789 and Dsui_0790 are separated by 104 nucleotides Dsui_0790 and Dsui_0791 are separated by 989 nucleotides
Dsui_0789: Dsui_0789 - diguanylate cyclase (GGDEF) domain-containing protein, at 795,535 to 796,566
_0789
Dsui_0790: Dsui_0790 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 796,671 to 797,705
_0790
Dsui_0791: Dsui_0791 - hypothetical protein, at 798,695 to 798,835
_0791
Position (kb) 796
797
798 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 795.697 kb on + strand, within Dsui_0789 at 795.705 kb on - strand, within Dsui_0789 at 795.711 kb on - strand, within Dsui_0789 at 795.758 kb on - strand, within Dsui_0789 at 795.764 kb on + strand, within Dsui_0789 at 795.857 kb on - strand, within Dsui_0789 at 795.883 kb on - strand, within Dsui_0789 at 795.887 kb on + strand, within Dsui_0789 at 795.923 kb on - strand, within Dsui_0789 at 796.006 kb on - strand, within Dsui_0789 at 796.017 kb on + strand, within Dsui_0789 at 796.133 kb on - strand, within Dsui_0789 at 796.136 kb on + strand, within Dsui_0789 at 796.139 kb on - strand, within Dsui_0789 at 796.205 kb on + strand, within Dsui_0789 at 796.213 kb on - strand, within Dsui_0789 at 796.254 kb on + strand, within Dsui_0789 at 796.254 kb on + strand, within Dsui_0789 at 796.254 kb on + strand, within Dsui_0789 at 796.254 kb on + strand, within Dsui_0789 at 796.308 kb on + strand, within Dsui_0789 at 796.308 kb on + strand, within Dsui_0789 at 796.406 kb on + strand, within Dsui_0789 at 796.412 kb on + strand at 796.472 kb on - strand at 796.479 kb on + strand at 796.493 kb on + strand at 796.520 kb on - strand at 796.536 kb on - strand at 796.547 kb on - strand at 796.573 kb on + strand at 796.590 kb on - strand at 796.637 kb on + strand at 796.656 kb on + strand at 797.710 kb on + strand at 797.732 kb on + strand at 797.740 kb on - strand at 797.847 kb on + strand at 797.954 kb on + strand at 797.959 kb on + strand at 797.964 kb on + strand at 797.974 kb on + strand at 797.982 kb on - strand at 797.991 kb on - strand at 797.998 kb on + strand at 797.998 kb on + strand at 797.998 kb on + strand at 798.006 kb on - strand at 798.006 kb on - strand at 798.006 kb on - strand at 798.006 kb on - strand at 798.006 kb on - strand at 798.007 kb on - strand at 798.014 kb on + strand at 798.022 kb on - strand at 798.030 kb on - strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.050 kb on + strand at 798.052 kb on + strand at 798.055 kb on + strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.058 kb on - strand at 798.063 kb on - strand at 798.071 kb on + strand at 798.079 kb on - strand at 798.089 kb on + strand at 798.095 kb on + strand at 798.102 kb on + strand at 798.107 kb on + strand at 798.108 kb on + strand at 798.108 kb on + strand at 798.109 kb on - strand at 798.110 kb on - strand at 798.116 kb on - strand at 798.116 kb on - strand at 798.116 kb on - strand at 798.117 kb on + strand at 798.123 kb on - strand at 798.123 kb on - strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.127 kb on + strand at 798.129 kb on + strand at 798.129 kb on + strand at 798.132 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.135 kb on - strand at 798.137 kb on + strand at 798.137 kb on + strand at 798.137 kb on + strand at 798.137 kb on + strand at 798.137 kb on + strand at 798.137 kb on + strand at 798.138 kb on + strand at 798.145 kb on - strand at 798.145 kb on - strand at 798.145 kb on - strand at 798.145 kb on - strand at 798.145 kb on - strand at 798.146 kb on - strand at 798.160 kb on + strand at 798.160 kb on + strand at 798.165 kb on + strand at 798.168 kb on - strand at 798.168 kb on - strand at 798.168 kb on - strand at 798.173 kb on - strand at 798.173 kb on - strand at 798.184 kb on + strand at 798.184 kb on + strand at 798.192 kb on + strand at 798.207 kb on - strand at 798.208 kb on + strand at 798.210 kb on + strand at 798.216 kb on - strand at 798.218 kb on - strand at 798.219 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.220 kb on + strand at 798.223 kb on - strand at 798.224 kb on + strand at 798.228 kb on + strand at 798.228 kb on + strand at 798.228 kb on + strand at 798.228 kb on + strand at 798.228 kb on - strand at 798.228 kb on - strand at 798.228 kb on - strand at 798.228 kb on - strand at 798.236 kb on - strand at 798.236 kb on - strand at 798.239 kb on + strand at 798.241 kb on + strand at 798.247 kb on - strand at 798.247 kb on - strand at 798.249 kb on - strand at 798.249 kb on - strand at 798.257 kb on + strand at 798.261 kb on - strand at 798.297 kb on - strand at 798.303 kb on - strand at 798.303 kb on - strand at 798.304 kb on + strand at 798.312 kb on - strand at 798.312 kb on - strand at 798.314 kb on + strand at 798.314 kb on + strand at 798.314 kb on + strand at 798.314 kb on + strand at 798.314 kb on + strand at 798.315 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on + strand at 798.322 kb on - strand at 798.322 kb on - strand at 798.329 kb on + strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.330 kb on - strand at 798.332 kb on + strand at 798.332 kb on - strand at 798.334 kb on + strand at 798.334 kb on + strand at 798.344 kb on + strand at 798.347 kb on + strand at 798.347 kb on - strand at 798.349 kb on + strand at 798.352 kb on + strand at 798.352 kb on + strand at 798.352 kb on - strand at 798.354 kb on + strand at 798.357 kb on - strand at 798.360 kb on - strand at 798.360 kb on - strand at 798.362 kb on + strand at 798.364 kb on + strand at 798.367 kb on + strand at 798.367 kb on + strand at 798.375 kb on - strand at 798.394 kb on + strand at 798.396 kb on + strand at 798.397 kb on + strand at 798.402 kb on - strand at 798.403 kb on + strand at 798.403 kb on + strand at 798.403 kb on + strand at 798.403 kb on + strand at 798.403 kb on + strand at 798.404 kb on - strand at 798.404 kb on - strand at 798.405 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.411 kb on - strand at 798.430 kb on + strand at 798.430 kb on - strand at 798.437 kb on + strand at 798.437 kb on + strand at 798.437 kb on + strand at 798.437 kb on + strand at 798.437 kb on + strand at 798.438 kb on + strand at 798.438 kb on + strand at 798.438 kb on + strand at 798.438 kb on - strand at 798.445 kb on - strand at 798.445 kb on - strand at 798.445 kb on - strand at 798.445 kb on - strand at 798.445 kb on - strand at 798.446 kb on - strand at 798.446 kb on - strand at 798.452 kb on + strand at 798.480 kb on + strand at 798.480 kb on + strand at 798.483 kb on - strand at 798.485 kb on + strand at 798.493 kb on - strand at 798.493 kb on - strand at 798.500 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.502 kb on + strand at 798.503 kb on + strand at 798.506 kb on - strand at 798.509 kb on + strand at 798.510 kb on - strand at 798.510 kb on - strand at 798.510 kb on - strand at 798.510 kb on - strand at 798.510 kb on - strand at 798.510 kb on - strand at 798.511 kb on - strand at 798.511 kb on - strand at 798.511 kb on - strand at 798.511 kb on - strand at 798.511 kb on - strand at 798.517 kb on - strand at 798.524 kb on + strand at 798.527 kb on - strand at 798.531 kb on + strand at 798.531 kb on + strand at 798.532 kb on + strand at 798.537 kb on - strand at 798.538 kb on + strand at 798.539 kb on + strand at 798.539 kb on + strand at 798.539 kb on + strand at 798.539 kb on + strand at 798.539 kb on + strand at 798.539 kb on - strand at 798.539 kb on - strand at 798.546 kb on - strand at 798.547 kb on - strand at 798.547 kb on - strand at 798.547 kb on - strand at 798.547 kb on - strand at 798.549 kb on + strand at 798.550 kb on + strand at 798.550 kb on + strand at 798.550 kb on + strand at 798.550 kb on + strand at 798.550 kb on + strand at 798.550 kb on + strand at 798.552 kb on - strand at 798.552 kb on - strand at 798.557 kb on - strand at 798.557 kb on - strand at 798.557 kb on - strand at 798.558 kb on + strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.558 kb on - strand at 798.560 kb on + strand at 798.566 kb on - strand at 798.567 kb on - strand at 798.568 kb on - strand at 798.574 kb on - strand at 798.575 kb on - strand at 798.579 kb on + strand at 798.580 kb on - strand at 798.586 kb on - strand at 798.605 kb on - strand at 798.610 kb on - strand at 798.610 kb on - strand at 798.610 kb on - strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.612 kb on + strand at 798.614 kb on + strand at 798.614 kb on + strand at 798.614 kb on + strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.620 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.622 kb on - strand at 798.639 kb on + strand at 798.639 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.640 kb on + strand at 798.641 kb on + strand at 798.641 kb on - strand at 798.647 kb on - strand at 798.647 kb on - strand at 798.647 kb on - strand at 798.648 kb on - strand at 798.648 kb on - strand at 798.648 kb on - strand at 798.648 kb on - strand at 798.648 kb on - strand at 798.648 kb on - strand at 798.649 kb on - strand at 798.649 kb on - strand at 798.649 kb on - strand at 798.649 kb on - strand at 798.662 kb on + strand at 798.662 kb on + strand at 798.671 kb on - strand at 798.671 kb on - strand at 798.672 kb on - strand at 798.676 kb on - strand at 798.681 kb on + strand at 798.691 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with sodium fluoride 40 mM remove 795,697 + Dsui_0789 0.16 -1.4 795,705 - Dsui_0789 0.16 +0.4 795,711 - Dsui_0789 0.17 -0.8 795,758 - Dsui_0789 0.22 -0.7 795,764 + Dsui_0789 0.22 -1.7 795,857 - Dsui_0789 0.31 +0.2 795,883 - Dsui_0789 0.34 -0.2 795,887 + Dsui_0789 0.34 -1.0 795,923 - Dsui_0789 0.38 -0.8 796,006 - Dsui_0789 0.46 -1.0 796,017 + Dsui_0789 0.47 -0.4 796,133 - Dsui_0789 0.58 +0.4 796,136 + Dsui_0789 0.58 -1.0 796,139 - Dsui_0789 0.59 +0.3 796,205 + Dsui_0789 0.65 -2.6 796,213 - Dsui_0789 0.66 -1.1 796,254 + Dsui_0789 0.70 -0.4 796,254 + Dsui_0789 0.70 -1.0 796,254 + Dsui_0789 0.70 -0.4 796,254 + Dsui_0789 0.70 +0.6 796,308 + Dsui_0789 0.75 -1.4 796,308 + Dsui_0789 0.75 -0.4 796,406 + Dsui_0789 0.84 -0.4 796,412 + +0.6 796,472 - -1.3 796,479 + +0.6 796,493 + +0.6 796,520 - -0.7 796,536 - -0.6 796,547 - -1.0 796,573 + -1.4 796,590 - -0.9 796,637 + -1.4 796,656 + -0.6 797,710 + -0.6 797,732 + +0.8 797,740 - -1.0 797,847 + -0.4 797,954 + -1.0 797,959 + -1.4 797,964 + -2.6 797,974 + -2.0 797,982 - -0.4 797,991 - +0.6 797,998 + +0.6 797,998 + -2.6 797,998 + -1.0 798,006 - -1.0 798,006 - -1.0 798,006 - +0.6 798,006 - -2.6 798,006 - +0.6 798,007 - -0.4 798,014 + +0.6 798,022 - +0.6 798,030 - +0.6 798,050 + +0.6 798,050 + -0.4 798,050 + -1.0 798,050 + -0.4 798,050 + -1.4 798,050 + -1.0 798,050 + +0.6 798,050 + -2.0 798,050 + -1.7 798,050 + -1.4 798,050 + -0.4 798,050 + +0.6 798,050 + +0.6 798,050 + -1.0 798,050 + +0.6 798,050 + -0.4 798,050 + -2.0 798,050 + +0.6 798,050 + +0.6 798,050 + -1.0 798,050 + -0.4 798,050 + -1.0 798,050 + -0.4 798,050 + -0.4 798,050 + +0.6 798,050 + -0.4 798,050 + -2.6 798,050 + +0.6 798,050 + -2.2 798,050 + -2.4 798,050 + -1.0 798,050 + -1.4 798,050 + +0.6 798,050 + -1.0 798,050 + -1.0 798,050 + -2.0 798,050 + +0.6 798,050 + -2.4 798,050 + -1.7 798,050 + +0.6 798,050 + +0.6 798,050 + -1.7 798,050 + -1.7 798,052 + -1.7 798,055 + +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - -1.4 798,058 - -2.0 798,058 - +0.6 798,058 - -1.4 798,058 - -1.7 798,058 - +0.6 798,058 - -0.4 798,058 - +0.6 798,058 - -0.4 798,058 - +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - +0.6 798,058 - -2.0 798,058 - -0.4 798,058 - +0.6 798,058 - +0.6 798,058 - -0.4 798,058 - -0.4 798,058 - +0.6 798,058 - -1.4 798,058 - -0.4 798,058 - +0.6 798,058 - +0.6 798,058 - -1.4 798,058 - -1.0 798,058 - -0.4 798,058 - +0.6 798,058 - -0.4 798,058 - -1.4 798,058 - -1.0 798,063 - -0.4 798,071 + -0.0 798,079 - +0.6 798,089 + -2.2 798,095 + -1.0 798,102 + -1.0 798,107 + -1.4 798,108 + -1.0 798,108 + +0.6 798,109 - +0.6 798,110 - -0.4 798,116 - -1.7 798,116 - +0.6 798,116 - +0.6 798,117 + +0.6 798,123 - -0.4 798,123 - +0.6 798,127 + -1.0 798,127 + -1.0 798,127 + +0.6 798,127 + +0.6 798,127 + +0.6 798,127 + -1.7 798,127 + -1.0 798,129 + -2.0 798,129 + -0.4 798,132 - +0.6 798,135 - +0.6 798,135 - -2.7 798,135 - -1.4 798,135 - -1.0 798,135 - -0.4 798,135 - +0.6 798,135 - -1.0 798,135 - -1.0 798,135 - -2.2 798,135 - +0.6 798,135 - +0.6 798,135 - +0.6 798,137 + -0.4 798,137 + -1.4 798,137 + -0.4 798,137 + -2.2 798,137 + -2.8 798,137 + +0.6 798,138 + -1.4 798,145 - 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Or see this region's nucleotide sequence