Experiment: L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29425 and AZOBR_RS29430 are separated by 16 nucleotides AZOBR_RS29430 and AZOBR_RS29435 overlap by 4 nucleotides AZOBR_RS29435 and AZOBR_RS29440 are separated by 2 nucleotides AZOBR_RS29440 and AZOBR_RS29445 are separated by 212 nucleotides
AZOBR_RS29425: AZOBR_RS29425 - hypothetical protein, at 722,570 to 723,424
_RS29425
AZOBR_RS29430: AZOBR_RS29430 - hemin ABC transporter substrate-binding protein, at 723,441 to 724,316
_RS29430
AZOBR_RS29435: AZOBR_RS29435 - hemin ABC transporter permease, at 724,313 to 725,422
_RS29435
AZOBR_RS29440: AZOBR_RS29440 - hemin ABC transporter ATP-binding protein, at 725,425 to 726,099
_RS29440
AZOBR_RS29445: AZOBR_RS29445 - transcriptional regulator, at 726,312 to 726,980
_RS29445
Position (kb) 724
725
726 Strain fitness (log2 ratio) -2
-1
0
1
2 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.652 kb on - strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.063 kb on - strand, within AZOBR_RS29430 at 724.887 kb on + strand, within AZOBR_RS29435 at 724.916 kb on + strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 725.920 kb on + strand, within AZOBR_RS29440 at 726.199 kb on + strand at 726.351 kb on + strand at 726.352 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days remove 723,651 + AZOBR_RS29430 0.24 -0.9 723,651 + AZOBR_RS29430 0.24 -0.5 723,651 + AZOBR_RS29430 0.24 +2.5 723,652 - AZOBR_RS29430 0.24 +1.1 724,062 + AZOBR_RS29430 0.71 -2.7 724,062 + AZOBR_RS29430 0.71 +0.4 724,062 + AZOBR_RS29430 0.71 +0.3 724,063 - AZOBR_RS29430 0.71 +0.5 724,887 + AZOBR_RS29435 0.52 +0.1 724,916 + AZOBR_RS29435 0.54 -0.1 724,917 - AZOBR_RS29435 0.54 +0.2 724,917 - AZOBR_RS29435 0.54 +0.6 724,917 - AZOBR_RS29435 0.54 +1.2 725,920 + AZOBR_RS29440 0.73 -1.8 726,199 + +0.5 726,351 + -0.1 726,352 - -0.1
Or see this region's nucleotide sequence