Experiment: L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07950 and AZOBR_RS07955 are separated by 258 nucleotides AZOBR_RS07955 and AZOBR_RS07960 are separated by 79 nucleotides
AZOBR_RS07950: AZOBR_RS07950 - hydroxypyruvate reductase, at 1,675,949 to 1,677,211
_RS07950
AZOBR_RS07955: AZOBR_RS07955 - tartronate semialdehyde reductase, at 1,677,470 to 1,678,378
_RS07955
AZOBR_RS07960: AZOBR_RS07960 - hydroxypyruvate isomerase, at 1,678,458 to 1,679,255
_RS07960
Position (kb)
1677
1678
1679 Strain fitness (log2 ratio)
-2
-1
0
1 at 1676.565 kb on + strand, within AZOBR_RS07950 at 1676.565 kb on + strand, within AZOBR_RS07950 at 1676.595 kb on + strand, within AZOBR_RS07950 at 1676.596 kb on - strand, within AZOBR_RS07950 at 1677.370 kb on + strand at 1677.371 kb on - strand at 1678.038 kb on + strand, within AZOBR_RS07955 at 1678.293 kb on + strand at 1678.534 kb on + strand at 1678.535 kb on - strand at 1678.559 kb on - strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.595 kb on - strand, within AZOBR_RS07960 at 1678.717 kb on + strand, within AZOBR_RS07960 at 1678.717 kb on + strand, within AZOBR_RS07960 at 1678.727 kb on - strand, within AZOBR_RS07960 at 1678.795 kb on + strand, within AZOBR_RS07960 at 1678.795 kb on + strand, within AZOBR_RS07960 at 1678.796 kb on - strand, within AZOBR_RS07960 at 1678.978 kb on + strand, within AZOBR_RS07960 at 1679.155 kb on + strand, within AZOBR_RS07960 at 1679.155 kb on + strand, within AZOBR_RS07960 at 1679.156 kb on - strand, within AZOBR_RS07960 at 1679.156 kb on - strand, within AZOBR_RS07960 at 1679.221 kb on + strand at 1679.221 kb on + strand at 1679.221 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days remove 1,676,565 + AZOBR_RS07950 0.49 -0.6 1,676,565 + AZOBR_RS07950 0.49 +0.6 1,676,595 + AZOBR_RS07950 0.51 -0.1 1,676,596 - AZOBR_RS07950 0.51 -0.6 1,677,370 + -1.0 1,677,371 - +0.1 1,678,038 + AZOBR_RS07955 0.62 +0.5 1,678,293 + +0.2 1,678,534 + -0.1 1,678,535 - +1.1 1,678,559 - AZOBR_RS07960 0.13 +0.5 1,678,594 + AZOBR_RS07960 0.17 -0.0 1,678,594 + AZOBR_RS07960 0.17 +0.0 1,678,594 + AZOBR_RS07960 0.17 +0.4 1,678,595 - AZOBR_RS07960 0.17 +0.1 1,678,717 + AZOBR_RS07960 0.32 -0.3 1,678,717 + AZOBR_RS07960 0.32 -0.5 1,678,727 - AZOBR_RS07960 0.34 -0.7 1,678,795 + AZOBR_RS07960 0.42 -0.6 1,678,795 + AZOBR_RS07960 0.42 +0.6 1,678,796 - AZOBR_RS07960 0.42 -2.2 1,678,978 + AZOBR_RS07960 0.65 -0.7 1,679,155 + AZOBR_RS07960 0.87 +0.3 1,679,155 + AZOBR_RS07960 0.87 +0.4 1,679,156 - AZOBR_RS07960 0.87 +1.7 1,679,156 - AZOBR_RS07960 0.87 +0.4 1,679,221 + +0.3 1,679,221 + +0.5 1,679,221 + +0.0
Or see this region's nucleotide sequence