Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14820

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,279,247	+				-1.7
3,279,247	+				-0.8
3,279,247	+				-0.9
3,279,247	+				+0.9
3,279,247	+				+0.5
3,279,247	+				+0.4
3,279,247	+				-0.3
3,279,247	+				-0.3
3,279,247	+				-1.8
3,279,248	-				-1.2
3,279,248	-				-1.1
3,279,248	-				-1.6
3,279,248	-				-2.5
3,279,248	-				-0.9
3,279,248	-				+0.2
3,279,248	-				+0.7
3,279,260	+				-0.6
3,279,260	+				-0.4
3,279,260	+				-0.2
3,279,260	+				+0.8
3,279,261	-				+0.3
3,279,261	-				-0.2
3,279,261	-				+0.4
3,279,275	+				+0.1
3,279,275	+				+0.4
3,279,275	+				-1.5
3,279,276	-				+0.9
3,279,398	+		AO353_14815	0.12	-0.3
3,279,398	+		AO353_14815	0.12	+0.0
3,279,399	-		AO353_14815	0.12	-0.8
3,279,399	-		AO353_14815	0.12	+0.2
3,279,399	-		AO353_14815	0.12	-0.3
3,279,399	-		AO353_14815	0.12	+0.3
3,279,399	-		AO353_14815	0.12	-0.7
3,279,543	+		AO353_14815	0.29	-1.2
3,279,673	-		AO353_14815	0.45	+0.1
3,279,673	-		AO353_14815	0.45	-1.4
3,279,673	-		AO353_14815	0.45	+0.3
3,279,673	-		AO353_14815	0.45	+0.6
3,279,777	+		AO353_14815	0.58	-1.0
3,279,777	+		AO353_14815	0.58	+1.8
3,279,777	+		AO353_14815	0.58	-0.7
3,279,778	-		AO353_14815	0.58	+1.0
3,279,778	-		AO353_14815	0.58	+0.1
3,279,778	-		AO353_14815	0.58	-0.7
3,279,849	+		AO353_14815	0.66	+1.1
3,279,849	+		AO353_14815	0.66	+0.0
3,279,849	+		AO353_14815	0.66	-0.2
3,279,849	+		AO353_14815	0.66	+0.3
3,279,849	+		AO353_14815	0.66	+1.0
3,279,849	+		AO353_14815	0.66	-0.5
3,279,849	+		AO353_14815	0.66	+0.4
3,279,849	+		AO353_14815	0.66	-0.1
3,279,850	-		AO353_14815	0.66	+0.5
3,279,850	-		AO353_14815	0.66	-0.2
3,279,850	-		AO353_14815	0.66	-0.3
3,279,850	-		AO353_14815	0.66	-1.6
3,279,850	-		AO353_14815	0.66	-0.6
3,279,871	+		AO353_14815	0.69	-0.2
3,279,871	+		AO353_14815	0.69	-0.4
3,279,872	-		AO353_14815	0.69	+0.0
3,279,872	-		AO353_14815	0.69	-0.5
3,279,872	-		AO353_14815	0.69	+0.2
3,280,101	+				+0.8
3,280,102	-				-1.4
3,280,117	+				+1.2
3,280,117	+				-1.4
3,280,117	+				-1.3
3,280,117	+				-0.3
3,280,117	+				+0.8
3,280,117	+				-2.1
3,280,117	+				+0.1
3,280,117	+				-0.5
3,280,117	+				-1.1
3,280,118	-				-1.1
3,280,118	-				+1.0
3,280,118	-				+1.3
3,280,118	-				-2.6
3,280,118	-				+0.7
3,280,118	-				-0.2
3,280,118	-				-0.4
3,280,118	-				-0.9
3,280,118	-				+1.8
3,280,118	-				+1.5
3,280,118	-				+1.2
3,280,118	-				-1.1
3,280,118	-				-1.2
3,280,118	-				-0.7
3,280,732	+		AO353_14820	0.40	+0.7
3,280,732	+		AO353_14820	0.40	+0.4
3,280,733	-		AO353_14820	0.40	-0.5
3,280,733	-		AO353_14820	0.40	+0.3
3,280,861	+		AO353_14820	0.49	+1.8
3,280,915	+		AO353_14820	0.53	-1.0
3,280,915	+		AO353_14820	0.53	-0.5
3,280,915	+		AO353_14820	0.53	-1.5
3,280,916	-		AO353_14820	0.53	+0.0
3,280,916	-		AO353_14820	0.53	-0.1
3,280,916	-		AO353_14820	0.53	-1.1
3,281,116	+		AO353_14820	0.67	+0.0
3,281,116	+		AO353_14820	0.67	+0.8
3,281,117	-		AO353_14820	0.67	-1.1
3,281,117	-		AO353_14820	0.67	+2.4
3,281,117	-		AO353_14820	0.67	+0.2
3,281,117	-		AO353_14820	0.67	-0.5
3,281,117	-		AO353_14820	0.67	-0.7
3,281,152	+		AO353_14820	0.69	-0.7
3,281,152	+		AO353_14820	0.69	+0.7
3,281,152	+		AO353_14820	0.69	-0.2
3,281,152	+		AO353_14820	0.69	-0.9
3,281,152	+		AO353_14820	0.69	+0.7
3,281,152	+		AO353_14820	0.69	-1.1
3,281,152	+		AO353_14820	0.69	-0.3
3,281,152	+		AO353_14820	0.69	-0.6
3,281,153	-		AO353_14820	0.69	-1.5
3,281,153	-		AO353_14820	0.69	+1.0
3,281,153	-		AO353_14820	0.69	-1.6
3,281,153	-		AO353_14820	0.69	+0.5
3,281,153	-		AO353_14820	0.69	+0.2
3,281,153	-		AO353_14820	0.69	-0.9
3,281,153	-		AO353_14820	0.69	-0.5
3,281,153	-		AO353_14820	0.69	-0.2
3,281,153	-		AO353_14820	0.69	-0.3
3,281,153	-		AO353_14820	0.69	-1.1
3,281,153	-		AO353_14820	0.69	-2.4
3,281,153	-		AO353_14820	0.69	-0.2
3,281,157	-		AO353_14820	0.69	-0.1
3,281,206	+		AO353_14820	0.73	-1.2
3,281,206	+		AO353_14820	0.73	-1.2
3,281,206	+		AO353_14820	0.73	+0.6
3,281,207	-		AO353_14820	0.73	+1.1
3,281,207	-		AO353_14820	0.73	-2.4
3,281,207	-		AO353_14820	0.73	-1.4
3,281,207	-		AO353_14820	0.73	+0.5
3,281,207	-		AO353_14820	0.73	-0.7
3,281,207	-		AO353_14820	0.73	+0.5
3,281,207	-		AO353_14820	0.73	-0.4
3,281,207	-		AO353_14820	0.73	+0.4
3,281,212	+		AO353_14820	0.73	+0.8
3,281,212	+		AO353_14820	0.73	+0.7
3,281,212	+		AO353_14820	0.73	-0.8
3,281,213	-		AO353_14820	0.73	-0.6
3,281,213	-		AO353_14820	0.73	-0.3
3,281,213	-		AO353_14820	0.73	+1.4
3,281,213	-		AO353_14820	0.73	+0.8
3,281,213	-		AO353_14820	0.73	+0.3
3,281,281	+		AO353_14820	0.78	-1.3
3,281,281	+		AO353_14820	0.78	-1.2
3,281,282	-		AO353_14820	0.78	-0.2
3,281,282	-		AO353_14820	0.78	-0.6
3,281,282	-		AO353_14820	0.78	-0.1
3,281,282	-		AO353_14820	0.78	-1.8
3,281,325	+		AO353_14820	0.81	+0.4
3,281,325	+		AO353_14820	0.81	-1.1
3,281,325	+		AO353_14820	0.81	+0.2
3,281,325	+		AO353_14820	0.81	-0.3
3,281,325	+		AO353_14820	0.81	-0.0
3,281,325	+		AO353_14820	0.81	-0.1
3,281,326	-		AO353_14820	0.81	-1.2
3,281,326	-		AO353_14820	0.81	+0.5
3,281,326	-		AO353_14820	0.81	-0.2
3,281,326	-		AO353_14820	0.81	-0.2
3,281,326	-		AO353_14820	0.81	+1.2
3,281,494	+				-0.3
3,281,494	+				+0.5
3,281,494	+				+0.6
3,281,494	+				+0.5
3,281,494	+				-1.5
3,281,494	+				-1.0
3,281,494	+				-0.8
3,281,495	-				-0.7
3,281,495	-				+0.0
3,281,495	-				+0.5
3,281,495	-				-2.0
3,281,598	+				+0.5
3,281,599	-				-0.9
3,281,599	-				+0.0
3,281,599	-				-1.1
3,281,608	+				+0.7
3,281,608	+				-0.5
3,281,608	+				+1.2
3,281,608	+				-2.7
3,281,609	-				-0.7
3,281,609	-				+0.4
3,281,609	-				-1.1
3,281,609	-				-0.7
3,281,609	-				-1.5
3,281,609	-				+0.2
3,281,667	+				-0.2
3,281,667	+				-1.6
3,281,668	-				-2.3
3,281,668	-				-0.8
3,281,668	-				-1.0
3,281,668	-				-0.0
3,281,676	+				+0.8
3,281,676	+				+0.3
3,281,676	+				+0.2
3,281,676	+				+0.2
3,281,772	+		AO353_14825	0.17	-0.7
3,281,772	+		AO353_14825	0.17	-1.4
3,281,772	+		AO353_14825	0.17	-1.2
3,281,772	+		AO353_14825	0.17	-1.5
3,281,772	+		AO353_14825	0.17	-2.1
3,281,772	+		AO353_14825	0.17	-1.9
3,281,772	+		AO353_14825	0.17	-0.7
3,281,773	-		AO353_14825	0.18	-0.3
3,281,773	-		AO353_14825	0.18	-0.2
3,281,795	+		AO353_14825	0.20	+0.2
3,281,803	+		AO353_14825	0.21	-0.8
3,281,804	-		AO353_14825	0.21	+0.4
3,281,804	-		AO353_14825	0.21	+0.9
3,281,804	-		AO353_14825	0.21	+0.5
3,281,804	-		AO353_14825	0.21	-0.7
3,281,943	+		AO353_14825	0.36	+0.7
3,281,943	+		AO353_14825	0.36	-0.2
3,281,943	+		AO353_14825	0.36	-0.2
3,281,944	-		AO353_14825	0.36	-1.0
3,282,001	+		AO353_14825	0.42	+1.5
3,282,001	+		AO353_14825	0.42	+1.0
3,282,002	-		AO353_14825	0.42	-0.3
3,282,002	-		AO353_14825	0.42	+0.2
3,282,037	+		AO353_14825	0.46	+0.2
3,282,037	+		AO353_14825	0.46	-0.4
3,282,038	-		AO353_14825	0.46	-3.3
3,282,038	-		AO353_14825	0.46	-1.2
3,282,038	-		AO353_14825	0.46	+0.6
3,282,142	+		AO353_14825	0.57	-1.8
3,282,143	-		AO353_14825	0.57	+0.2
3,282,143	-		AO353_14825	0.57	-0.4
3,282,380	+		AO353_14825	0.82	+0.4
3,282,380	+		AO353_14825	0.82	-0.6
3,282,380	+		AO353_14825	0.82	-0.2
3,282,380	+		AO353_14825	0.82	+0.7
3,282,380	+		AO353_14825	0.82	+1.8
3,282,380	+		AO353_14825	0.82	+0.4
3,282,381	-		AO353_14825	0.82	+1.6
3,282,381	-		AO353_14825	0.82	-0.6
3,282,381	-		AO353_14825	0.82	-1.1
3,282,381	-		AO353_14825	0.82	+0.0
3,282,553	+				-0.7
3,282,598	+				-0.2
3,282,598	+				-1.5
3,282,598	+				-0.5
3,282,598	+				-2.3
3,282,598	+				-0.7
3,282,598	+				+1.2
3,282,599	-				-0.1
3,282,599	-				-0.7
3,282,599	-				-0.2
3,282,599	-				+0.4