Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_02910

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	D-Alanine (C)
				remove
616,521	+			+0.5
616,521	+			+0.8
616,521	+			-1.0
616,521	+			-0.2
616,521	+			-0.8
616,521	+			+2.2
616,521	+			-0.6
616,522	-			-0.4
616,559	-			+2.0
616,559	-			+0.6
616,559	-			-0.6
616,565	+			+1.1
616,565	+			-0.8
616,565	+			-0.7
616,566	-			-0.0
616,566	-			+1.3
616,566	-			-2.3
616,585	+			+0.5
616,585	+			-0.0
616,586	-			-1.1
616,652	+			-1.4
616,652	+			-0.1
616,653	-			-0.1
616,740	+	AO353_02905	0.14	+0.9
616,740	+	AO353_02905	0.14	-0.8
616,741	-	AO353_02905	0.14	-1.0
616,741	-			+1.8
616,755	-	AO353_02905	0.16	+0.7
616,755	-	AO353_02905	0.16	-1.1
616,755	-	AO353_02905	0.16	+1.2
616,798	+	AO353_02905	0.23	+1.6
616,798	+	AO353_02905	0.23	+0.4
616,798	+	AO353_02905	0.23	-0.7
616,798	+	AO353_02905	0.23	-1.2
616,798	+	AO353_02905	0.23	-1.5
616,798	+	AO353_02905	0.23	-0.3
616,798	+	AO353_02905	0.23	-1.3
616,799	-	AO353_02905	0.23	-1.4
616,799	-	AO353_02905	0.23	-0.3
616,799	-	AO353_02905	0.23	-1.3
616,799	-	AO353_02905	0.23	-2.1
616,802	+	AO353_02905	0.23	+0.5
616,802	+	AO353_02905	0.23	-1.2
616,802	+	AO353_02905	0.23	-0.3
616,802	+	AO353_02905	0.23	+0.0
616,802	+	AO353_02905	0.23	+0.4
616,803	-	AO353_02905	0.23	-0.4
616,803	-	AO353_02905	0.23	-0.2
616,803	-	AO353_02905	0.23	+1.2
616,803	-	AO353_02905	0.23	+1.1
617,006	+	AO353_02905	0.53	-0.2
617,006	+	AO353_02905	0.53	-0.7
617,006	+	AO353_02905	0.53	-0.6
617,006	+	AO353_02905	0.53	+1.8
617,006	+	AO353_02905	0.53	-1.1
617,007	-	AO353_02905	0.53	-0.7
617,007	-	AO353_02905	0.53	-0.6
617,007	-	AO353_02905	0.53	+0.2
617,007	-	AO353_02905	0.53	-0.0
617,007	-	AO353_02905	0.53	-0.3
617,007	-	AO353_02905	0.53	+0.2
617,007	-	AO353_02905	0.53	-1.0
617,087	+	AO353_02905	0.64	+0.5
617,087	+	AO353_02905	0.64	-0.1
617,088	-	AO353_02905	0.64	+0.1
617,088	-	AO353_02905	0.64	+1.0
617,088	-	AO353_02905	0.64	-0.6
617,126	+	AO353_02905	0.70	-2.3
617,126	+	AO353_02905	0.70	-0.7
617,126	+	AO353_02905	0.70	-1.3
617,127	-	AO353_02905	0.70	-0.5
617,127	-	AO353_02905	0.70	-1.3
617,127	-	AO353_02905	0.70	+0.1
617,127	-	AO353_02905	0.70	+0.5
617,127	-	AO353_02905	0.70	-0.8
617,174	+	AO353_02905	0.77	+0.9
617,174	+	AO353_02905	0.77	+0.6
617,175	-	AO353_02905	0.77	-0.5
617,281	+			-0.7
617,281	+			+0.0
617,420	+			-0.5
617,420	+			-0.9
617,420	+			-1.3
617,420	+			-0.9
617,420	+			-0.2
617,421	-			-0.2
617,421	-			+0.3
617,486	+			+0.2
617,498	+	AO353_02910	0.10	-0.5
617,498	+	AO353_02910	0.10	-0.4
617,498	+	AO353_02910	0.10	+0.5
617,498	+	AO353_02910	0.10	-0.4
617,572	+	AO353_02910	0.15	-0.4
617,572	+	AO353_02910	0.15	+1.1
617,573	-	AO353_02910	0.15	-1.9
617,573	-	AO353_02910	0.15	+0.0
617,573	-	AO353_02910	0.15	-0.4
617,683	+	AO353_02910	0.22	+0.3
617,684	-	AO353_02910	0.22	-1.5
617,987	+	AO353_02910	0.41	+0.8
617,987	+	AO353_02910	0.41	-0.0
617,988	-	AO353_02910	0.41	+0.4
617,988	-	AO353_02910	0.41	-0.7
618,232	+	AO353_02910	0.56	-0.0
618,232	+	AO353_02910	0.56	-0.7
618,232	+	AO353_02910	0.56	+0.0
618,232	+	AO353_02910	0.56	+0.5
618,232	+	AO353_02910	0.56	-3.3
618,232	+	AO353_02910	0.56	+0.2
618,232	+	AO353_02910	0.56	+0.2
618,233	-	AO353_02910	0.56	+0.5
618,233	-	AO353_02910	0.56	-1.3
618,233	-	AO353_02910	0.56	-0.2
618,233	-	AO353_02910	0.56	-0.7
618,233	-	AO353_02910	0.56	-1.8
618,233	-	AO353_02910	0.56	-0.8
618,233	-	AO353_02910	0.56	-1.1
618,233	-	AO353_02910	0.56	+0.5
618,274	+	AO353_02910	0.59	-0.9
618,334	+	AO353_02910	0.62	+0.5
618,334	+	AO353_02910	0.62	-1.4
618,334	+	AO353_02910	0.62	-1.4
618,334	+	AO353_02910	0.62	-1.0
618,334	+	AO353_02910	0.62	+0.4
618,335	-	AO353_02910	0.63	+1.0
618,335	-	AO353_02910	0.63	-0.8
618,335	-	AO353_02910	0.63	+0.8
618,335	-	AO353_02910	0.63	+0.3
618,335	-	AO353_02910	0.63	-0.5
618,335	-	AO353_02910	0.63	+1.8
618,335	-	AO353_02910	0.63	-0.4
618,335	-	AO353_02910	0.63	-0.2
618,373	+	AO353_02910	0.65	+0.5
618,373	+	AO353_02910	0.65	-1.9
618,373	+	AO353_02910	0.65	-1.3
618,373	+	AO353_02910	0.65	-0.4
618,374	-	AO353_02910	0.65	+1.8
618,374	-	AO353_02910	0.65	-1.5
618,374	-	AO353_02910	0.65	-0.5
618,374	-	AO353_02910	0.65	-1.0
618,374	-	AO353_02910	0.65	-0.4
618,374	-	AO353_02910	0.65	-0.7
618,374	-	AO353_02910	0.65	-1.0
618,374	-	AO353_02910	0.65	-0.1
618,476	+	AO353_02910	0.71	-1.8
618,608	-	AO353_02910	0.80	-0.3
618,608	-	AO353_02910	0.80	+0.6
618,608	-	AO353_02910	0.80	-0.4
618,635	+	AO353_02910	0.81	+0.1
618,635	+	AO353_02910	0.81	+0.2
618,636	-	AO353_02910	0.81	-0.9
618,636	-	AO353_02910	0.81	-0.0
618,636	-	AO353_02910	0.81	-0.8
618,636	-	AO353_02910	0.81	-1.4
618,636	-	AO353_02910	0.81	-2.1
618,760	+	AO353_02910	0.89	+1.1
618,761	-	AO353_02910	0.89	-0.6
618,878	+			-0.5
618,878	+			+0.3
618,879	-			+1.6
618,926	-			-0.8
618,953	+			+0.6
618,953	+			+1.3
618,953	+			-0.8
618,953	+			+0.2
618,953	+			-0.1
618,953	+			+1.5
618,953	+			+0.5
618,953	+			-0.5
618,954	-			-1.8
618,954	-			-0.3
618,954	-			-1.0
618,954	-			-0.3
618,954	-			-0.4
619,064	+			-1.2
619,066	+			-0.5
619,066	+			-0.7
619,066	+			-0.6
619,066	+			+0.8
619,066	+			-0.6
619,066	+			-0.0
619,066	+			-0.1
619,066	+			+0.6
619,066	+			-0.9
619,066	+			+0.5
619,067	-			+1.8
619,067	-			-0.8
619,067	-			-1.9
619,067	-			-0.6
619,067	-			+1.6
619,067	-			-1.4
619,067	-			-1.5
619,067	-			-1.5
619,067	-			+1.4
619,067	-			+1.0
619,067	-			+1.3
619,067	-			-0.2
619,067	-			+0.2
619,110	+			+1.4
619,110	+			+0.9
619,110	+			-0.5
619,178	+			-1.2
619,178	+			-0.4
619,179	-			-0.7
619,179	-			-0.4
619,179	-			+0.1
619,181	+			-0.3
619,181	+			-0.2
619,190	+			-0.5
619,190	+			-0.4
619,190	+			-0.9
619,190	+			-1.9
619,190	+			-0.1
619,191	-			+0.1
619,191	-			+0.1
619,246	+			-0.2
619,246	+			+1.5
619,247	-			-1.2
619,247	-			+0.3
619,247	-			-0.2
619,274	+			+0.5
619,274	+			+1.4
619,274	+			-0.8
619,323	+			+0.1
619,323	+			-0.2
619,323	+			+1.6
619,323	+			-1.0
619,323	+			-0.5
619,323	+			-0.8
619,323	+			-0.3
619,323	+			+0.3
619,324	-			+0.9
619,324	-			-1.1
619,324	-			-1.5
619,324	-			-0.4
619,324	-			-0.7
619,324	-			-2.0
619,324	-			+0.0
619,372	+			-0.5
619,372	+			-0.8
619,373	-			-1.3
619,373	-			+0.2
619,381	+			+1.5
619,381	+			-1.5
619,381	+			+0.3
619,381	+			-0.7
619,382	-			+0.5
619,382	-			-0.1
619,392	-			+0.6
619,408	+			-0.6
619,408	+			-1.3
619,408	+			+0.5
619,408	+			-0.0
619,454	+			-0.1
619,454	+			+0.6
619,454	+			+0.2
619,454	+			-0.1
619,454	+			+1.2
619,455	-			-0.9
619,455	-			-0.2
619,455	-			-0.8
619,455	-			+0.2
619,455	-			+0.5
619,459	+			-0.4
619,459	+			-1.1
619,459	+			+1.1
619,460	-			-0.7
619,651	+			+0.9
619,651	+			-0.8
619,652	-			-0.7
619,652	-			+2.0
619,727	+			-0.2
619,727	+			+0.6
619,727	+			-0.9
619,727	+			-3.0
619,727	+			+0.8
619,727	+			-0.3
619,727	+			-0.8
619,727	+			-1.0
619,727	+			+1.0
619,727	+			-1.4
619,727	+			-0.2
619,727	+			+0.4
619,727	+			-0.2
619,727	+			+1.0
619,727	+			-0.8
619,727	+			+1.6
619,727	+			-0.5
619,727	+			-0.3
619,727	+			+1.4
619,727	+			-2.5
619,727	+			+1.0
619,728	-			+0.5
619,728	-			-0.0
619,728	-			-0.2
619,728	-			+0.7
619,728	-			+0.8
619,728	-			-0.3
619,728	-			-0.5
619,728	-			-1.1
619,728	-			-1.0
619,728	-			-1.0
619,728	-			-0.4
619,728	-			-1.5
619,728	-			+0.3
619,728	-			+1.0
619,728	-			-0.2
619,728	-			-0.2
619,728	-			+0.8
619,728	-			-0.3
619,728	-			+0.2
619,728	-			+0.1
619,728	-			+0.6
619,728	-			+0.3
619,728	-			-1.2
619,728	-			-1.2
619,745	+			-1.1
619,774	+			-2.1
619,774	+			+0.6
619,774	+			+0.4
619,775	-			+0.3
619,775	-			-1.0
619,840	+			-0.4
619,841	-			-1.2
619,853	+			-0.8
619,854	-			+0.5
619,854	-			-1.2
619,854	-			-0.7
619,855	+			-1.0
619,855	+			-0.9
619,855	+			-0.0
619,855	+			-0.7
619,855	+			-0.5
619,855	+			-0.8
619,855	+			+0.2
619,856	-			-0.9
619,856	-			+0.1
619,856	-			-0.5
619,856	-			+0.8
619,856	-			+1.0
619,856	-			-0.3
619,856	-			-0.4
619,856	-			+1.1
619,856	-			-0.9
619,856	-			+0.5
619,856	-			-0.1
619,856	-			+0.2
619,856	-			-0.4
619,856	-			-1.5
619,856	-			+0.5
619,856	-			-0.2
619,875	-			-0.1

Or see this region's nucleotide sequence