Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3374

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,760,108	-		Pf1N1B4_3373	0.26	+1.5
3,760,377	+		Pf1N1B4_3373	0.51	+1.1
3,760,377	+		Pf1N1B4_3373	0.51	+1.5
3,760,378	-		Pf1N1B4_3373	0.51	-0.7
3,760,378	-		Pf1N1B4_3373	0.51	-1.1
3,760,617	+		Pf1N1B4_3373	0.74	-1.1
3,760,748	+				-0.1
3,760,748	+		Pf1N1B4_3373	0.86	+2.1
3,760,748	+		Pf1N1B4_3373	0.86	-0.1
3,760,748	+		Pf1N1B4_3373	0.86	-0.1
3,760,818	+				+1.3
3,760,819	-				+0.5
3,760,888	-				-1.1
3,760,920	+				+1.2
3,760,923	-				+2.9
3,760,986	+				-0.9
3,760,986	+				+1.9
3,760,986	+				-1.1
3,760,986	+				-1.7
3,760,987	-				-0.1
3,760,987	-				+0.9
3,760,999	+				-0.7
3,760,999	+				+2.2
3,761,000	-				-1.1
3,761,000	-				+0.7
3,761,012	+				-0.3
3,761,012	+				+0.7
3,761,012	+				+0.9
3,761,035	+				-0.7
3,761,035	+				+0.2
3,761,036	-				-0.1
3,761,036	-				+0.9
3,761,036	-				+0.9
3,761,039	+				+2.9
3,761,039	+				+0.8
3,761,039	+				+1.5
3,761,039	+				-0.1
3,761,039	+				+1.5
3,761,039	+				+0.5
3,761,039	+				+0.9
3,761,040	-				-1.1
3,761,040	-				-0.1
3,761,040	-				-0.7
3,761,068	+				-0.1
3,761,068	+				+0.3
3,761,069	-				+0.9
3,761,298	+		Pf1N1B4_3374	0.28	-1.4
3,761,444	+		Pf1N1B4_3374	0.43	-0.5
3,761,444	+		Pf1N1B4_3374	0.43	+0.9
3,761,445	-		Pf1N1B4_3374	0.43	+1.5
3,761,445	-		Pf1N1B4_3374	0.43	-0.1
3,761,445	-				-0.1
3,761,544	+				+0.9
3,761,544	+		Pf1N1B4_3374	0.53	-0.1
3,761,544	+		Pf1N1B4_3374	0.53	-1.7
3,761,545	-		Pf1N1B4_3374	0.53	+3.1
3,761,595	-		Pf1N1B4_3374	0.58	-0.1
3,761,596	+				-0.1
3,761,597	-		Pf1N1B4_3374	0.58	+0.4
3,761,843	-		Pf1N1B4_3374	0.84	-0.7
3,761,843	-		Pf1N1B4_3374	0.84	-0.7
3,762,067	-				-0.1
3,762,069	+				-1.1
3,762,069	+				+1.0
3,762,070	-				+0.9
3,762,114	+				+0.5
3,762,216	-				+0.3
3,762,238	+				-0.7
3,762,239	-				-0.1
3,762,239	-				+1.5
3,762,284	-				-0.3
3,762,284	-				-0.1
3,762,287	+				+0.9
3,762,287	+				-0.7
3,762,287	+				+0.9
3,762,288	-				-0.7
3,762,288	-				+0.2
3,762,288	-				+1.2
3,762,288	-				+0.1
3,762,288	-				-0.1
3,762,288	-				+0.9
3,762,288	-				-0.7
3,762,288	-				+3.0
3,762,291	-				+0.3
3,762,291	-				+1.2
3,762,291	-				+1.1
3,762,303	+				+1.2
3,762,303	+				+3.1
3,762,303	+				-0.1
3,762,303	+				+0.7
3,762,303	+				+0.6
3,762,304	-				+0.2
3,762,304	-				-0.7
3,762,304	-				-0.2
3,762,304	-				-0.4
3,762,304	-				+1.9
3,762,304	-				+1.5
3,762,304	-				+0.2
3,762,304	-				+1.7
3,762,366	+				+2.7
3,762,366	+				+1.9
3,762,366	+				-0.1
3,762,366	+				+1.5
3,762,366	+				-0.1
3,762,366	+				-0.4
3,762,366	+				+2.2
3,762,366	+				-1.1
3,762,366	+				+1.0
3,762,366	+				+1.2
3,762,366	+				+0.2
3,762,366	+				-0.6
3,762,366	+				+0.5
3,762,367	-				-1.7
3,762,367	-				-0.4
3,762,367	-				+0.4
3,762,367	-				-1.1
3,762,367	-				-1.1
3,762,367	-				-0.5
3,762,367	-				+1.1
3,762,367	-				-0.1
3,762,367	-				-0.1
3,762,367	-				+1.5
3,762,367	-				+0.8
3,762,367	-				-0.6
3,762,367	-				-0.8
3,762,367	-				+0.5
3,762,367	-				-0.1
3,762,441	+		Pf1N1B4_3375	0.14	-0.1
3,762,441	+		Pf1N1B4_3375	0.14	+0.7
3,762,441	+		Pf1N1B4_3375	0.14	+0.6
3,762,441	+		Pf1N1B4_3375	0.14	-1.1
3,762,441	+		Pf1N1B4_3375	0.14	-0.5
3,762,441	+		Pf1N1B4_3375	0.14	+0.5
3,762,441	+		Pf1N1B4_3375	0.14	-0.5
3,762,441	+		Pf1N1B4_3375	0.14	+0.5
3,762,441	+		Pf1N1B4_3375	0.14	+2.1
3,762,441	+		Pf1N1B4_3375	0.14	+0.3
3,762,441	+		Pf1N1B4_3375	0.14	-1.7
3,762,441	+		Pf1N1B4_3375	0.14	+0.7
3,762,441	+				-0.1
3,762,442	-		Pf1N1B4_3375	0.14	-0.4
3,762,442	-		Pf1N1B4_3375	0.14	+0.5
3,762,442	-		Pf1N1B4_3375	0.14	-1.1
3,762,442	-		Pf1N1B4_3375	0.14	+0.2
3,762,442	-		Pf1N1B4_3375	0.14	-0.7
3,762,442	-		Pf1N1B4_3375	0.14	+0.5
3,762,442	-		Pf1N1B4_3375	0.14	+0.2
3,762,442	-		Pf1N1B4_3375	0.14	-0.1
3,762,442	-				-0.1
3,762,442	-		Pf1N1B4_3375	0.14	-2.7
3,762,442	-		Pf1N1B4_3375	0.14	+1.6
3,762,442	-				+0.9
3,762,442	-		Pf1N1B4_3375	0.14	+1.0
3,762,442	-		Pf1N1B4_3375	0.14	-0.4
3,762,442	-		Pf1N1B4_3375	0.14	-0.4
3,762,443	+		Pf1N1B4_3375	0.15	+0.9
3,762,443	+		Pf1N1B4_3375	0.15	+0.6
3,762,443	+				+1.9
3,762,444	-		Pf1N1B4_3375	0.15	+0.4
3,762,444	-		Pf1N1B4_3375	0.15	+0.5
3,762,456	+		Pf1N1B4_3375	0.16	+2.7
3,762,456	+		Pf1N1B4_3375	0.16	+2.2
3,762,456	+		Pf1N1B4_3375	0.16	+1.2
3,762,456	+		Pf1N1B4_3375	0.16	-1.5
3,762,456	+		Pf1N1B4_3375	0.16	+0.3
3,762,456	+		Pf1N1B4_3375	0.16	-0.5
3,762,456	+		Pf1N1B4_3375	0.16	+0.2
3,762,456	+		Pf1N1B4_3375	0.16	+1.5
3,762,456	+		Pf1N1B4_3375	0.16	-1.1
3,762,456	+		Pf1N1B4_3375	0.16	-0.1
3,762,457	-		Pf1N1B4_3375	0.16	+1.5
3,762,457	-		Pf1N1B4_3375	0.16	-0.8
3,762,457	-		Pf1N1B4_3375	0.16	-1.7
3,762,457	-		Pf1N1B4_3375	0.16	+0.7
3,762,457	-		Pf1N1B4_3375	0.16	+0.1
3,762,457	-		Pf1N1B4_3375	0.16	+0.2
3,762,457	-		Pf1N1B4_3375	0.16	-0.1
3,762,486	+		Pf1N1B4_3375	0.19	+1.2
3,762,542	+		Pf1N1B4_3375	0.25	-0.1
3,762,542	+		Pf1N1B4_3375	0.25	+0.5
3,762,542	+		Pf1N1B4_3375	0.25	+0.7
3,762,542	+		Pf1N1B4_3375	0.25	-2.4
3,762,543	-		Pf1N1B4_3375	0.25	+0.2
3,762,543	-		Pf1N1B4_3375	0.25	-2.7
3,762,543	-		Pf1N1B4_3375	0.25	+0.7
3,762,579	+				+1.5
3,762,579	+		Pf1N1B4_3375	0.29	+0.7
3,762,579	+		Pf1N1B4_3375	0.29	-1.1
3,762,580	-		Pf1N1B4_3375	0.29	-0.1
3,762,580	-		Pf1N1B4_3375	0.29	-0.5
3,762,651	+		Pf1N1B4_3375	0.37	+1.1
3,762,652	-		Pf1N1B4_3375	0.37	+0.7
3,762,652	-		Pf1N1B4_3375	0.37	+0.3
3,762,652	-		Pf1N1B4_3375	0.37	-0.1
3,762,663	+		Pf1N1B4_3375	0.38	+0.3
3,762,663	+		Pf1N1B4_3375	0.38	+1.9
3,762,663	+		Pf1N1B4_3375	0.38	+0.7
3,762,879	+		Pf1N1B4_3375	0.61	+0.5
3,762,879	+		Pf1N1B4_3375	0.61	+0.2
3,762,879	+		Pf1N1B4_3375	0.61	-3.1
3,762,880	-		Pf1N1B4_3375	0.61	+1.5
3,762,880	-		Pf1N1B4_3375	0.61	-0.1
3,762,880	-		Pf1N1B4_3375	0.61	+0.5
3,762,880	-		Pf1N1B4_3375	0.61	+0.9
3,762,880	-		Pf1N1B4_3375	0.61	+0.4
3,762,921	+		Pf1N1B4_3375	0.65	+0.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.9
3,762,921	+		Pf1N1B4_3375	0.65	-0.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.5
3,762,921	+		Pf1N1B4_3375	0.65	+3.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.9
3,762,921	+		Pf1N1B4_3375	0.65	-1.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.5
3,762,921	+		Pf1N1B4_3375	0.65	-0.4
3,762,921	+		Pf1N1B4_3375	0.65	-1.1
3,762,921	+		Pf1N1B4_3375	0.65	-0.1
3,762,921	+		Pf1N1B4_3375	0.65	+0.6
3,762,922	-		Pf1N1B4_3375	0.66	-0.6
3,762,922	-		Pf1N1B4_3375	0.66	+2.2
3,762,922	-		Pf1N1B4_3375	0.66	-0.1
3,762,922	-		Pf1N1B4_3375	0.66	+2.2
3,762,922	-		Pf1N1B4_3375	0.66	+1.2
3,762,922	-		Pf1N1B4_3375	0.66	-0.1
3,762,922	-		Pf1N1B4_3375	0.66	+0.5
3,762,922	-		Pf1N1B4_3375	0.66	-1.1
3,762,922	-		Pf1N1B4_3375	0.66	-0.9
3,762,922	-		Pf1N1B4_3375	0.66	-1.1
3,762,922	-		Pf1N1B4_3375	0.66	+0.9
3,762,922	-				+0.9
3,762,922	-		Pf1N1B4_3375	0.66	+0.2
3,762,922	-		Pf1N1B4_3375	0.66	-1.1