Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08195

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,542,451	-				-3.3
1,542,470	+				-0.7
1,542,591	-				-3.0
1,542,649	-				-1.7
1,542,963	-				-4.3
1,543,179	+				-1.9
1,543,196	-				-2.6
1,543,201	+				-4.3
1,543,223	-				-3.5
1,543,223	-				-3.1
1,543,224	+				-3.1
1,543,224	+				-4.0
1,543,224	+				-1.2
1,543,244	-				-1.0
1,543,244	-				-1.8
1,543,245	+				-2.1
1,543,277	+		MMP_RS08195	0.10	-2.8
1,543,331	-		MMP_RS08195	0.20	-0.5
1,543,332	+		MMP_RS08195	0.20	-1.7
1,543,403	-		MMP_RS08195	0.33	-1.6
1,543,403	-		MMP_RS08195	0.33	-0.9
1,543,404	+		MMP_RS08195	0.34	-4.2
1,543,404	+		MMP_RS08195	0.34	-2.9
1,543,404	+		MMP_RS08195	0.34	-3.2
1,543,404	+		MMP_RS08195	0.34	-2.0
1,543,404	+		MMP_RS08195	0.34	-2.6
1,543,404	+		MMP_RS08195	0.34	-2.5
1,543,404	+		MMP_RS08195	0.34	-2.1
1,543,405	-		MMP_RS08195	0.34	-0.8
1,543,405	-		MMP_RS08195	0.34	-0.4
1,543,406	+		MMP_RS08195	0.34	-3.7
1,543,407	-		MMP_RS08195	0.34	-2.9
1,543,407	-		MMP_RS08195	0.34	-0.4
1,543,418	+		MMP_RS08195	0.36	-2.7
1,543,425	-		MMP_RS08195	0.37	-1.5
1,543,515	-		MMP_RS08195	0.54	-1.2
1,543,550	-		MMP_RS08195	0.60	-0.9
1,543,551	+		MMP_RS08195	0.61	-0.7
1,543,595	+		MMP_RS08195	0.69	-1.3
1,543,754	-				-0.3
1,543,947	+				-1.7
1,544,036	-		MMP_RS08200	0.11	-1.3
1,544,178	-		MMP_RS08200	0.20	-1.8
1,544,286	-		MMP_RS08200	0.27	-1.7
1,544,287	+		MMP_RS08200	0.27	-2.7
1,544,317	+		MMP_RS08200	0.29	-1.7
1,544,390	+		MMP_RS08200	0.33	-1.0
1,544,409	-		MMP_RS08200	0.35	-1.6
1,544,409	-		MMP_RS08200	0.35	-1.7
1,544,413	+		MMP_RS08200	0.35	-1.9
1,544,418	-		MMP_RS08200	0.35	-3.7
1,544,465	+		MMP_RS08200	0.38	-0.8
1,544,475	+		MMP_RS08200	0.39	-2.1
1,544,586	-		MMP_RS08200	0.45	-1.5
1,544,606	-		MMP_RS08200	0.47	-1.6
1,544,606	-		MMP_RS08200	0.47	-1.7
1,544,670	-		MMP_RS08200	0.51	-2.2
1,544,676	-		MMP_RS08200	0.51	-1.3
1,544,677	+		MMP_RS08200	0.51	-1.6
1,544,682	-		MMP_RS08200	0.51	-1.5
1,544,682	-		MMP_RS08200	0.51	-1.6
1,544,683	+		MMP_RS08200	0.51	-1.9
1,544,690	+		MMP_RS08200	0.52	-1.5
1,544,690	-		MMP_RS08200	0.52	-1.3
1,544,690	-		MMP_RS08200	0.52	-1.3
1,544,690	-		MMP_RS08200	0.52	-2.9
1,544,691	+		MMP_RS08200	0.52	-0.9
1,544,691	+		MMP_RS08200	0.52	-1.8
1,544,693	+		MMP_RS08200	0.52	-1.0
1,544,693	+		MMP_RS08200	0.52	-0.8
1,544,702	+		MMP_RS08200	0.53	-2.0
1,544,721	+		MMP_RS08200	0.54	-2.0
1,544,723	+		MMP_RS08200	0.54	-0.9
1,544,723	+		MMP_RS08200	0.54	-1.1
1,544,761	+		MMP_RS08200	0.56	-0.8