Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07090

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,355,544	+				-0.2
1,355,555	+				+0.5
1,355,590	-				-0.3
1,355,591	+				-2.4
1,355,591	+				-0.2
1,355,635	+				+0.0
1,355,635	+				+0.4
1,355,642	+				-0.1
1,355,642	+				-0.2
1,355,642	+				+0.2
1,355,642	+				+0.7
1,355,644	+				+0.2
1,355,862	+		MMP_RS07085	0.30	-0.4
1,355,862	+		MMP_RS07085	0.30	+0.3
1,355,862	+		MMP_RS07085	0.30	+0.4
1,355,863	-		MMP_RS07085	0.30	+0.2
1,355,866	+		MMP_RS07085	0.30	-0.0
1,355,868	-		MMP_RS07085	0.31	+0.3
1,355,869	+		MMP_RS07085	0.31	+0.4
1,355,940	-		MMP_RS07085	0.40	+0.1
1,355,993	+		MMP_RS07085	0.48	-0.1
1,356,013	+		MMP_RS07085	0.50	-0.3
1,356,023	+		MMP_RS07085	0.52	-0.9
1,356,035	+		MMP_RS07085	0.53	-1.3
1,356,083	+		MMP_RS07085	0.60	+0.8
1,356,182	+		MMP_RS07085	0.74	+0.8
1,356,379	+				-1.9
1,356,393	-				-2.2
1,356,395	-				-2.7
1,356,395	-				-2.2
1,356,396	+				-3.0
1,356,605	-		MMP_RS07090	0.26	-0.5
1,356,658	+		MMP_RS07090	0.32	-1.3
1,356,675	-		MMP_RS07090	0.34	-1.3
1,356,929	-		MMP_RS07090	0.63	-0.8
1,356,930	+		MMP_RS07090	0.63	+0.6
1,356,933	-		MMP_RS07090	0.64	-0.9
1,357,004	-		MMP_RS07090	0.72	-0.4
1,357,005	+		MMP_RS07090	0.72	-1.6
1,357,006	-		MMP_RS07090	0.72	-0.6
1,357,006	-		MMP_RS07090	0.72	+0.5
1,357,006	-		MMP_RS07090	0.72	-1.0
1,357,007	+		MMP_RS07090	0.72	-2.2
1,357,007	+		MMP_RS07090	0.72	-0.5
1,357,007	+		MMP_RS07090	0.72	+0.1
1,357,015	-		MMP_RS07090	0.73	-0.5
1,357,016	+		MMP_RS07090	0.73	-0.0
1,357,071	-		MMP_RS07090	0.79	-1.6
1,357,074	-		MMP_RS07090	0.80	-1.6
1,357,075	+		MMP_RS07090	0.80	-0.4
1,357,090	+		MMP_RS07090	0.82	-1.4
1,357,090	+		MMP_RS07090	0.82	-1.9
1,357,090	+		MMP_RS07090	0.82	-0.8
1,357,094	-		MMP_RS07090	0.82	+0.2
1,357,095	+		MMP_RS07090	0.82	-1.4
1,357,159	-		MMP_RS07090	0.89	-1.4
1,357,161	-		MMP_RS07090	0.90	-0.1
1,357,164	-				-1.1
1,357,165	+				-0.4
1,357,298	-				+0.0
1,357,302	+				+0.5
1,357,323	-				+0.9
1,357,341	+				-0.3
1,357,388	+		MMP_RS07095	0.19	+0.1
1,357,417	-		MMP_RS07095	0.31	+0.9
1,357,417	-		MMP_RS07095	0.31	+1.5
1,357,450	-		MMP_RS07095	0.45	+0.7
1,357,487	-		MMP_RS07095	0.60	-0.0
1,357,587	+				+1.0
1,357,665	-				+0.5
1,357,914	+		MMP_RS07100	0.28	-0.2
1,357,955	-		MMP_RS07100	0.32	+0.3
1,357,992	+		MMP_RS07100	0.35	-0.3
1,357,994	+		MMP_RS07100	0.35	+0.1
1,357,994	+		MMP_RS07100	0.35	-0.1
1,357,996	-		MMP_RS07100	0.36	+0.6
1,357,999	-		MMP_RS07100	0.36	-0.0
1,358,061	-		MMP_RS07100	0.42	-0.3
1,358,105	-		MMP_RS07100	0.46	+0.3
1,358,177	-		MMP_RS07100	0.53	-0.4
1,358,211	-		MMP_RS07100	0.56	+0.2
1,358,212	+		MMP_RS07100	0.56	-0.1
1,358,212	+		MMP_RS07100	0.56	-0.0
1,358,213	-		MMP_RS07100	0.56	+0.4
1,358,224	+		MMP_RS07100	0.57	-0.4