Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06770

Experiment: Formate with hypochlorite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate with hypochlorite 5 mM
1,297,650	-		MMP_RS06765	0.15	+0.4
1,297,706	+		MMP_RS06765	0.21	+0.3
1,297,965	-		MMP_RS06765	0.48	+0.7
1,297,966	+		MMP_RS06765	0.48	-0.7
1,297,966	+		MMP_RS06765	0.48	-0.0
1,297,967	-		MMP_RS06765	0.48	+1.1
1,298,034	-		MMP_RS06765	0.55	+0.1
1,298,034	-		MMP_RS06765	0.55	+0.1
1,298,035	+		MMP_RS06765	0.55	+0.5
1,298,038	-		MMP_RS06765	0.55	+0.7
1,298,411	-				+0.1
1,298,661	-				-1.2
1,298,661	-				-1.2
1,298,661	-				-0.1
1,298,661	-				-0.7
1,298,662	+				-1.1
1,298,662	+				-1.2
1,298,662	+				-0.2
1,298,663	-				-0.4
1,299,163	-		MMP_RS06770	0.29	-0.1
1,299,249	-		MMP_RS06770	0.32	-1.0
1,299,546	-		MMP_RS06770	0.45	-0.5
1,299,581	-		MMP_RS06770	0.47	-0.8
1,299,581	-		MMP_RS06770	0.47	-1.3
1,299,775	+		MMP_RS06770	0.55	-1.0
1,299,841	+		MMP_RS06770	0.58	-0.2
1,299,901	+		MMP_RS06770	0.61	-1.6
1,299,980	-		MMP_RS06770	0.64	-1.5
1,299,981	+		MMP_RS06770	0.64	-0.9
1,300,091	-		MMP_RS06770	0.69	-0.9
1,300,100	-		MMP_RS06770	0.70	-0.6
1,300,110	+		MMP_RS06770	0.70	-1.9
1,300,150	+		MMP_RS06770	0.72	-1.6
1,300,461	-		MMP_RS06770	0.85	-0.7
1,300,623	+				-0.2
1,300,797	+				-1.5
1,300,799	-				-0.9
1,300,836	+				-0.4
1,300,878	-				-0.6
1,300,879	+				-0.5
1,300,881	+				-1.4
1,300,882	-				+0.1
1,300,884	-				+0.5
1,300,884	-				+0.1
1,300,958	+				-0.7
1,300,960	+				+0.3
1,301,108	-				-0.4
1,301,444	+				-1.7
1,301,588	-				-1.0